AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02098 | ATGGGTTACCAATGTGACCATTGTGGGGAGGCACGATCAATGGTCTACTGTCGATCAGATGCAGCCTACTTGTGTTTATCGTGTGATCGTGTTGTTCATTCTGCAAATGCGCTATCAAAACGCCATTCAAGAACACTTATATGTGATAAGTGCAATTCACAACCTGCGTTGGTTAGATGCATAGAGGAAAAAGTATCTCTATGTCAGAATTGTGATTGGGTTGGTCATAATGATTCAACCAATGGTTCAAGCACACACAGTCGGCAAACGTTAAATTGCTACTCAGGCTGCCCTTCAGCCGTAGAGCTTTCGTCTATTTGGTCGTTTATGTCAGAGTCACATTTCGTTAATGATTCTGCTTGTGAGCAAGAAATGGGCTCAATGAGCATCGCTGATAATAGCCAAGGTCCCTCTAGAAGTAATAATAGTAATCAAGATATACTTGTTACCGGTGAAGAGAACCGTTTGCAAAGTGGAAAGAACACACATGCTTTTACGGGTTCTTCAAGTGTTCATGCAGATAATAGCCCGCAAAATGTAGCTCAAGAAGTCGGACCGGTAAATTCATCTACATCCAAGATATCACATTCAGGGACAAAAGAACTTGAACCATTTGTTGATAATGATGGATTCTATGTTGACTTTAATATGGATGAAGTTGACTTGAGCATTGAGAATTATGAAGAACTCTTTGGTGTAGGCCATAATGATCCAGAACATCTCTTCGCTAAAGATGGGATTGACAGTTTGTTTGGTGGCGCTGAATCTTCATATGCTGCCAAGGAGTCTTCAACTGGCCAGGCAAATCCAGCACAACCAACATGTAGTAACGCATCAGCTGACTCATTAGTGAGCTGCAAAACGGAACCAACCCGTTATGGAAGGCAACACTCAAATATATCTTTTTCAAGTCTCACTGGGGAGAGCAGTGCTGGTGAATATCAAGACTGTGGAGCTTCTTCGATGCTTCTTATGGGTGAGCCACCATGGTGCACTCCAGGCGTTGCTCCTAGCAATACACCTTCTGGCAGCAGAAGTGATGCTGTTCTTCGTTACAAGGAGAAAAAGAAGATGCGCAAGTTTGATAAGAGAGTAAGATATGCTACACGAAAGGCACGGGCTGATGTGAGAAAGCGTGTGAAAGGGCGGTTTGTGAAGGCTGGTGATGCTTATGATTATGACCCAATGAGTCAAACCAGAAGTTTCTAA | 1209 | 42.93 | MGYQCDHCGEARSMVYCRSDAAYLCLSCDRVVHSANALSKRHSRTLICDKCNSQPALVRCIEEKVSLCQNCDWVGHNDSTNGSSTHSRQTLNCYSGCPSAVELSSIWSFMSESHFVNDSACEQEMGSMSIADNSQGPSRSNNSNQDILVTGEENRLQSGKNTHAFTGSSSVHADNSPQNVAQEVGPVNSSTSKISHSGTKELEPFVDNDGFYVDFNMDEVDLSIENYEELFGVGHNDPEHLFAKDGIDSLFGGAESSYAAKESSTGQANPAQPTCSNASADSLVSCKTEPTRYGRQHSNISFSSLTGESSAGEYQDCGASSMLLMGEPPWCTPGVAPSNTPSGSRSDAVLRYKEKKKMRKFDKRVRYATRKARADVRKRVKGRFVKAGDAYDYDPMSQTRSF | 402 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02098 | 402 | MobiDBLite | consensus disorder prediction | 155 | 198 | - | - | |
| Ecan3g02098 | 402 | ProSiteProfiles | Zinc finger B-box type profile. | 5 | 47 | IPR000315 | GO:0008270(InterPro) | |
| Ecan3g02098 | 402 | CDD | Bbox1-BBX-like | 5 | 47 | IPR049808 | - | |
| Ecan3g02098 | 402 | ProSiteProfiles | CCT domain profile. | 345 | 387 | IPR010402 | GO:0005515(InterPro) | |
| Ecan3g02098 | 402 | PANTHER | ZINC FINGER PROTEIN CONSTANS-LIKE 10 | 4 | 391 | - | - | |
| Ecan3g02098 | 402 | MobiDBLite | consensus disorder prediction | 155 | 201 | - | - | |
| Ecan3g02098 | 402 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270(InterPro) | |
| Ecan3g02098 | 402 | CDD | Bbox1-BBX-like | 47 | 91 | IPR049808 | - | |
| Ecan3g02098 | 402 | Pfam | CCT motif | 345 | 387 | IPR010402 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02098 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84823 | Ecan3g02098 | Ecan4g02608 | |
| 84824 | Ecan3g02098 | Ecan5g01610 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr1:40283387 | Ecan3g02098 | Ecan-Chr3:31770711 | dispersed | |
| Ecan | Ecan-Chr3:31770711 | Ecan5g01611 | Ecan-Chr5:29825776 | dispersed | |
| Ecan | Ecan-Chr3:31770711 | Ecan3g02099 | Ecan-Chr3:31770711 | tandem | |
| Ecan | Ecan-Chr7:35893380 | Ecan3g02098 | Ecan-Chr3:31770711 | transposed | |
| Ecan | Ecan-Chr8:37860917 | Ecan3g02098 | Ecan-Chr3:31770711 | transposed | |
| Ecan | Ecan-Chr5:31654343 | Ecan3g02098 | Ecan-Chr3:31770711 | transposed | |
| Ecan | Ecan-Chr3:31770711 | Ecan4g02608 | Ecan-Chr4:35941063 | wgd | |
| Ecan | Ecan-Chr3:31770711 | Ecan5g01610 | Ecan-Chr5:29825734 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ecan8g03230 | . | 1 | 75 | C2C2-CO-like Transcription Factor family | AT4G27310 | 65.789 | 8.29e-31 | 111.0 | |
| Ecan8g02695 | . | 12 | 401 | C2C2-CO-like Transcription Factor family | AT2G33500 | 35.982 | 1.65e-73 | 234.0 | |
| Ecan8g01955 | . | 67 | 319 | C2C2-CO-like Transcription Factor family | AT3G02380 | 28.939 | 8.34e-17 | 78.2 | |
| Ecan9g02069 | ACH | 331 | 388 | C2C2-CO-like Transcription Factor family | AT5G24930 | 46.552 | 2.39e-10 | 60.1 | |
| Ecan1g00776 | . | 1 | 75 | C2C2-CO-like Transcription Factor family | AT4G27310 | 59.211 | 3.08e-29 | 106.0 | |
| Ecan1g01225 | ACH | 268 | 319 | C2C2-CO-like Transcription Factor family | AT3G02380 | 48.077 | 3.01e-09 | 55.1 | |
| Ecan1g02588 | . | 10 | 283 | C2C2-CO-like Transcription Factor family | AT1G68190 | 39.934 | 6.44e-60 | 196.0 | |
| Ecan2g03113 | . | 1 | 326 | C2C2-CO-like Transcription Factor family | AT1G75540 | 42.297 | 1.10e-68 | 216.0 | |
| Ecan2g02323 | ACH | 11 | 347 | C2C2-CO-like Transcription Factor family | AT3G02380 | 49.864 | 2.46e-106 | 314.0 | |
| Ecan2g01722 | ACH | 285 | 330 | C2C2-CO-like Transcription Factor family | AT5G57660 | 52.174 | 2.99e-10 | 57.0 | |
| Ecan3g00427 | ACH | 236 | 321 | C2C2-CO-like Transcription Factor family | AT1G49130 | 32.558 | 3.06e-07 | 50.1 | |
| Ecan3g00599 | ACH | 9 | 355 | C2C2-CO-like Transcription Factor family | AT5G57660 | 43.407 | 3.49e-78 | 242.0 | |
| Ecan3g02170 | ACH | 1 | 299 | C2C2-CO-like Transcription Factor family | AT1G78600 | 50.331 | 2.93e-83 | 250.0 | |
| Ecan3g02098 | ACH | 1 | 372 | C2C2-CO-like Transcription Factor family | AT3G07650 | 53.365 | 3.25e-134 | 387.0 | |
| Ecan3g02099 | ACH | 1 | 372 | C2C2-CO-like Transcription Factor family | AT3G07650 | 53.365 | 3.25e-134 | 387.0 | |
| Ecan3g01943 | ACH | 1 | 204 | C2C2-CO-like Transcription Factor family | AT1G75540 | 52.632 | 2.58e-61 | 192.0 | |
| Ecan1g03737 | ACH | 284 | 329 | C2C2-CO-like Transcription Factor family | AT5G57660 | 54.348 | 3.68e-10 | 58.9 | |
| Ecan3g00175 | . | 252 | 319 | C2C2-CO-like Transcription Factor family | AT3G02380 | 39.706 | 2.03e-09 | 55.5 | |
| Ecan4g02608 | ACH | 1 | 372 | C2C2-CO-like Transcription Factor family | AT3G07650 | 55.053 | 4.13e-134 | 385.0 | |
| Ecan4g03150 | ACH | 7 | 354 | C2C2-CO-like Transcription Factor family | AT5G57660 | 46.027 | 2.48e-91 | 276.0 | |
| Ecan4g02720 | ACH | 1 | 299 | C2C2-CO-like Transcription Factor family | AT1G78600 | 50.0 | 1.90e-83 | 251.0 | |
| Ecan5g02180 | . | 45 | 406 | C2C2-CO-like Transcription Factor family | AT5G24930 | 48.969 | 3.08e-94 | 285.0 | |
| Ecan5g00598 | ACH | 269 | 398 | C2C2-CO-like Transcription Factor family | AT1G68520 | 40.458 | 1.10e-19 | 88.6 | |
| Ecan5g01798 | . | 1 | 110 | C2C2-CO-like Transcription Factor family | AT4G27310 | 48.214 | 1.41e-30 | 110.0 | |
| Ecan5g01646 | ACH | 1 | 299 | C2C2-CO-like Transcription Factor family | AT1G78600 | 51.118 | 6.29e-94 | 278.0 | |
| Ecan5g01610 | ACH | 1 | 373 | C2C2-CO-like Transcription Factor family | AT5G48250 | 54.987 | 2.98e-133 | 384.0 | |
| Ecan5g01611 | ACH | 131 | 372 | C2C2-CO-like Transcription Factor family | AT3G07650 | 47.191 | 4.88e-66 | 207.0 | |
| Ecan5g02722 | ACH | 281 | 331 | C2C2-CO-like Transcription Factor family | AT5G57660 | 56.863 | 4.09e-12 | 64.7 | |
| Ecan6g02124 | ACH | 12 | 347 | C2C2-CO-like Transcription Factor family | AT3G02380 | 50.653 | 1.66e-118 | 346.0 | |
| Ecan6g03660 | ACH | 240 | 327 | C2C2-CO-like Transcription Factor family | AT5G15850 | 37.755 | 3.54e-10 | 58.2 | |
| Ecan6g03659 | ACH | 240 | 327 | C2C2-CO-like Transcription Factor family | AT5G15850 | 37.755 | 3.03e-10 | 58.5 | |
| Ecan6g00831 | ACH | 247 | 386 | C2C2-CO-like Transcription Factor family | AT5G24930 | 33.557 | 1.90e-11 | 63.9 | |
| Ecan1g00618 | . | 1 | 183 | C2C2-CO-like Transcription Factor family | AT4G38960 | 58.605 | 5.47e-79 | 233.0 | |
| Ecan1g00617 | . | 1 | 183 | C2C2-CO-like Transcription Factor family | AT4G38960 | 58.605 | 5.47e-79 | 233.0 | |
| Ecan7g02562 | . | 4 | 328 | C2C2-CO-like Transcription Factor family | AT2G47890 | 43.401 | 3.21e-95 | 286.0 | |
| Ecan7g01912 | ACH | 185 | 270 | C2C2-CO-like Transcription Factor family | AT2G24790 | 41.86 | 1.40e-11 | 61.6 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ecan | CCT | 1.4e-15 | CL0281 | TF | C2C2-CO-like |