AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02135 ATGGGGAATAAGTTGGGAAGAAGAAGACAATTAGTTGATGAAAAGTATACAAGACCACAAGGATTGTATCAACATAAAGATGTAGATCATAAGAAGCTTAGAAAGCTTATACTTGATTCTAAACTTGCTCCTTGTTATCCTGGTGATGATGATTGTAGTTGTGATCTTGAAGAATGCCCTATTTGTTTCTTGTATTATCCAAGTCTAAATAGATCAAGATGTTGCATGAAAGGCATTTGTACCGAGTGTTTCTTGCAAATGAAGACACCCAATTCTACGCGCCCAACACAATGTCCATTTTGTAAAACATTGAACTACGCTGTGGAGTATAGAGGCATGAAGAGCAAGGAGGAAAAGGGGCAGGAACAAATTGAAGAACAAAGGGTGATAGAAGCCAAAATAAGAATGAGACAACAAGAAATTCTGGATGAAGAGGAACGAATGCTAAAAAGGCAAGATATGAGTTCCTCAAGTAGGATAAATGAACCAAGTGAAGCTGAATATTTCTCCCAAGCAGCGACAACTTCTTCTGAAGGTGAGGAAATCATTTCTGCTCCACATTCGGTTGGTGCAACAATTAGATATCCTCAACGTTCTAGGGAGAACAGAGAAGACGAGTTTGACCTTGATCCTGAAAATATAATGCTCATGGAAGCTATCTGGTTGTCGTATCAGGAGGATAACAAGCATCAACACCATAATTCCAACTATGGCGATGCTGCCCAGTTAGCAAAATATGCAACTGAAGTTCGTGTTTTAGCGTCTATGGCTCCACAAGCCGAATCATCAGCCTCAACATCATCACCTTCTGGGGGTCTTGCATGTGCCATAGCCGCTCTGGCTGAACGGCAGCAAAAGGGAGGAGAATCATCAACCAATTACAGCCACTACGGTGGGAATATGTCAACATACAACGTGCATCCAGACCATAGCTCAACAGGGTTATCACTTGATAGCCATCTGCAAATAGATCATGATGGTTCAGATGAATTGACTGAACCAGTCTATGGGTATGATAATTCAAGTGCAGTAGATGATATAAGCAGGGGACAACGCGGTCAACAGGATGAAATGGAGAATGGTTATGGTGGGGGGAGTATAGTTGTTCCCGAGAGCTTCGAAGAGCAGATGATGCTAGCCATGGCAGTTTCGCTGGCAGAGGCTCGAGCTAGGACTAGTACACCAGAAGTTGCTTGGATTTAG 1203 42.31 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCMKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGMKSKEEKGQEQIEEQRVIEAKIRMRQQEILDEEERMLKRQDMSSSSRINEPSEAEYFSQAATTSSEGEEIISAPHSVGATIRYPQRSRENREDEFDLDPENIMLMEAIWLSYQEDNKHQHHNSNYGDAAQLAKYATEVRVLASMAPQAESSASTSSPSGGLACAIAALAERQQKGGESSTNYSHYGGNMSTYNVHPDHSSTGLSLDSHLQIDHDGSDELTEPVYGYDNSSAVDDISRGQRGQQDEMENGYGGGSIVVPESFEEQMMLAMAVSLAEARARTSTPEVAWI 400
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02135 400 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Ecan3g02135 400 PANTHER PROTEIN SIP5 1 308 IPR039301 GO:0005737(PANTHER)
Ecan3g02135 400 MobiDBLite consensus disorder prediction 310 363 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02135 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84839 Ecan3g02135 Ecan4g02584
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:32194249 Ecan4g02584 Ecan-Chr4:35710628 wgd