Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02139 | ATGTCTTCTTCACTACTTCATCCACTTACCTCTCCATTTACTACTTCTCCTTCCAAACCAAACACTTTCAAGGCTCGAACCAATGGGTTCAGAGTCTCATGCAACGTAAAACCAACAAATGATGATAACAATGAAACCCAAAAACTCATCCTGCCGGCCTACAATATTGTAGACCGAAGGAACCTCCTTGTTGGTCTCGGCGGTCTCTGTACCGCCGCCAACTTATCTAACTTGTCATCGGCATTAGCTGATCCCATTACAGCTCCAGATATCACATCCATATGCAAGGATGCGACGTCAAATATCAAACTTGAAGGGGCGATTAGGACAGAAAAATGTTGTCCTCCTAGCCTTGGAAAGACGATTAAACCTTTCGTCTTTCCAAAAGGAGGAGAAAAGGTGAGAATGAGATGGCCTGCTCATAAAGGAACTAAAGAGCAAGTCGAGAAATACAAACAAGCCATTGCAGCCATGCGGGCTCTTCCAGACGAACACCCGCACAGCTTTAAACAACAAGCTTCTATCCACTGTGCTTATTGTAACGGCGGTTACACTCAAGTCGATAGTGGGTTTCCCGATATAGATATCCAGATTCATAACTCGTGGCTTTTCTTTCCTTTCCATCGTTGGTACTTGTACTTTTACGAAAGAATTTTGGGTACTTTGATTAACGATCCCACTTTCGCTTTGCCGTACTGGAACTGGGACGATCCAGCTGGAATGGAGCTTCCGGAAATATTTCTTGGTGACGAAAGCAACCCTCTGTATGACGTGTACCGTGACCCTAAACATCAACCCCCACTATTAGTCGACTTAGCATTCAATGGGAGCGACAAGGATCCGGATATTGATCAAAAAGAGTGCAATCTGTTCGCAGTGTACCGTGACTTGGTTAGGAATGCGAGTGATACCAAGAGTTTCTTTGGAGGTGAGTATGTAGCTGGTGATGAGCCCATCAAGAGTGGGGATAAATCAATTGGATCTGTAGAAGCCGGTACTCACACTGCGGTCCACAGATGGGTTGGTGACTCGAACCGGCCTAATGGAGAGGACATGGGTAATTTTTATTCCGCGGGTTATGACCCCGTGTTTTATTGCCATCATGCTAATGTCGACCGAATGTGGAAGCTATGGAAGGATTTCGGCACTCCAGGACACGTGGAACCAACCAAGGACGATTGGTTAAATGCTTCGTACGTGTTCTACGACGAGAATCAAGACCTTGTTCGAGTTTATAACAAAGACTCGGTCGATACAAGGAAGCTCAAGTTCGATTATGCAAGATCTGATCTTGGTGAGCTCAAATGGAGCAAGAGTCGGCCCCCCAAACGTAACGTAAAGTCACAAGCCGCTACTATCCCACTAGGCGATGTGAAATCGTTGGACCAGGTGAAGTTCCCGGTTAAGCTAGACAAAATCATCAAGTTCCGTGTGAAGAGGCCAGCTGTGAACAGGACTGATGACCAAAAGGCGAAATCCAAAGAGCTTTTGTTGATCAACGGGATCAAATTCAGCGCTGATAAATTTGTAAAGTTTGATGTGTTTGTGAATGACAAGGTTAACGTTGGTACGGACAAATTTCCCACGCCTTGTGACCCTGAATACGCGGGTGGGTTTGCTCAGGTTCCACATAGCGAGAGGAGTAAAATGAAGATGACTAGTGCTGCGAGGTTCGGGCTGGACGAGCTGTTGGATGACACAAACACTGAAGGTGACGAGTACGCGGTGGTTGCATTGGTGCCAAGGACCGGGACCCAAGATCTCACCATTGAGGAAATTAAGATCGAGTTGGTTCCCGTTGTGTGA | 1806 | 46.23 | MSSSLLHPLTSPFTTSPSKPNTFKARTNGFRVSCNVKPTNDDNNETQKLILPAYNIVDRRNLLVGLGGLCTAANLSNLSSALADPITAPDITSICKDATSNIKLEGAIRTEKCCPPSLGKTIKPFVFPKGGEKVRMRWPAHKGTKEQVEKYKQAIAAMRALPDEHPHSFKQQASIHCAYCNGGYTQVDSGFPDIDIQIHNSWLFFPFHRWYLYFYERILGTLINDPTFALPYWNWDDPAGMELPEIFLGDESNPLYDVYRDPKHQPPLLVDLAFNGSDKDPDIDQKECNLFAVYRDLVRNASDTKSFFGGEYVAGDEPIKSGDKSIGSVEAGTHTAVHRWVGDSNRPNGEDMGNFYSAGYDPVFYCHHANVDRMWKLWKDFGTPGHVEPTKDDWLNASYVFYDENQDLVRVYNKDSVDTRKLKFDYARSDLGELKWSKSRPPKRNVKSQAATIPLGDVKSLDQVKFPVKLDKIIKFRVKRPAVNRTDDQKAKSKELLLINGIKFSADKFVKFDVFVNDKVNVGTDKFPTPCDPEYAGGFAQVPHSERSKMKMTSAARFGLDELLDDTNTEGDEYAVVALVPRTGTQDLTIEEIKIELVPVV | 601 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02139 | 601 | Pfam | Common central domain of tyrosinase | 167 | 379 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Ecan3g02139 | 601 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 361 | 372 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | PIRSF | PPO-plant | 1 | 599 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Ecan3g02139 | 601 | Gene3D | - | 84 | 430 | IPR008922 | - | |
| Ecan3g02139 | 601 | SUPERFAMILY | Di-copper centre-containing domain | 98 | 429 | IPR008922 | - | |
| Ecan3g02139 | 601 | PRINTS | Tyrosinase copper-binding domain signature | 333 | 344 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | PRINTS | Tyrosinase copper-binding domain signature | 199 | 216 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | PRINTS | Tyrosinase copper-binding domain signature | 360 | 378 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | PRINTS | Tyrosinase copper-binding domain signature | 230 | 235 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | Pfam | Polyphenol oxidase middle domain | 390 | 441 | IPR022739 | GO:0004097(InterPro) | |
| Ecan3g02139 | 601 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 199 | 216 | IPR002227 | GO:0016491(InterPro) | |
| Ecan3g02139 | 601 | PANTHER | TYROSINASE FAMILY MEMBER | 58 | 563 | IPR050316 | - | |
| Ecan3g02139 | 601 | Pfam | Protein of unknown function (DUF-B2219) | 466 | 597 | IPR022740 | GO:0004097(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02139 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84842 | Ecan3g02139 | Ecan4g02536 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:32232266 | Ecan4g02583 | Ecan-Chr4:35701645 | dispersed | |
| Ecan | Ecan-Chr3:32226273 | Ecan3g02139 | Ecan-Chr3:32232266 | tandem | |
| Ecan | Ecan-Chr3:32232266 | Ecan3g02140 | Ecan-Chr3:32236380 | tandem |