Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02142	ATGGCAGAGCGAAAGGTACTAAATAAGTACTATCCGCCGGATTTCGATCCGGCAAAAATTCCAAGGCGGCGCATGCCCAAGAATCAGCAAATAAAGGTTAGAATGATGCTTCCCATGAGCATTCGTTGCAGCACATGTGGAAACTACATATACAAGGGCACAAAATTTAATTCACGTAAAGAAGATGTTATTGGAGAGACATATCTTGGAATTCAAATATTCAGATTTTATTTCAAGTGCACCAAATGTTCAGCTGAGATCACCATGAAGACGGACCCTCAAAACTCTGATTACACTGTTGAGTCAGGAGCTGCAAGAAATTTTGAGCCTTGGCGTGCAGAAGATGAGGTAGGTGAAGAGGAGCAGAGGAAACGAGATGCTGAAGAGATGGGAGATGCAATGAAGTCATTGGAGAATAGAACAAATGAGTCAAAAAGAGAGATGGACATCCTTGCAGCACTGGATGAAGTGAAGTCTATGAAGTCAAGACATGCACATGTAAGCGTGGATAATATGCTCGAGGCCTTGCAGCGATCAGCTCCAGTACAGCAGCAGGAGGACAACCTTGAAGAGGAAGATGAAGCCCTTATAAAATCCCTCTTCCAGGGATCAAGAGAATATATCCGCAGAATTGATGACCATGAACTTGATGATGACGATGATTTGATTCTTTCAGGTCGTGACAATGGTGAATCTTCACAAAATGGCTCTAAGAAACGGAAGGTTTTTGAAGGAGTTTCTGATAACCCAACAGATTACCTAGCGAAAAGCAGTACTGTTGAAAAGTTGAATAATCAAAAAGATGTTCCAAGTGGCACTATTGCACTCAAGTCTTCAACGATAAAATTCTCTGTTGTGAAGAAACAACCAGAGGTCAAAACACAAGCAAGTGAAAAAGACGAGAAGACCAAAACTACAAGTGGTAATGGATTACAATCGTTATGTCAGTATGACGACAGTAGTGATGAAGAATAA	975	41.23	MAERKVLNKYYPPDFDPAKIPRRRMPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEITMKTDPQNSDYTVESGAARNFEPWRAEDEVGEEEQRKRDAEEMGDAMKSLENRTNESKREMDILAALDEVKSMKSRHAHVSVDNMLEALQRSAPVQQQEDNLEEEDEALIKSLFQGSREYIRRIDDHELDDDDDLILSGRDNGESSQNGSKKRKVFEGVSDNPTDYLAKSSTVEKLNNQKDVPSGTIALKSSTIKFSVVKKQPEVKTQASEKDEKTKTTSGNGLQSLCQYDDSSDEE	324

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02142	324	PANTHER	SPLICING FACTOR YJU2	1	295	IPR007590	GO:0000398(InterPro)\|GO:0008380(PANTHER)\|GO:0071006(PANTHER)
	Ecan3g02142	324	MobiDBLite	consensus disorder prediction	251	274	-	-
	Ecan3g02142	324	MobiDBLite	consensus disorder prediction	212	274	-	-
	Ecan3g02142	324	MobiDBLite	consensus disorder prediction	212	226	-	-
	Ecan3g02142	324	Pfam	Saf4-Yju2 protein	9	322	IPR007590	GO:0000398(InterPro)
	Ecan3g02142	324	MobiDBLite	consensus disorder prediction	287	324	-	-
	Ecan3g02142	324	Hamap	Splicing factor YJU2 [YJU2].	1	321	IPR043701	GO:0000398(InterPro)
	Ecan3g02142	324	Coils	Coil	127	154	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02142	K13115	coiled-coil domain-containing protein 130

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:32265636	Ecan6g02669	Ecan-Chr6:36539133	dispersed
	Ecan	Ecan-Chr3:32265636	Ecan3g02142	Ecan-Chr3:32265636	tandem
	Ecan	Ecan-Chr3:32265636	Ecan3g02143	Ecan-Chr3:32272374	tandem