AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02159 ATGTCTGCAAGGAACCGTGGCGGACCTCCGGTTCCGATGGCGCCGGTACACGAGCCTCCATTGTTCGGAAGGAACCGAGGTCCGATTCCGATGCCCATGCCGATGCCGATGCCGTCACACGCATTACTCGAAGAACTGAGAGAATCTCAGTTTGTGCACGGTCACGGTCACAGGCCGCTACCGCCTCATCCGGCGGTTATAGAGGAGCGGTTAGCGGTTCAACATCAGGATATTCAGGGACTGTTGATTGATAACCAGCGGTTGGCTGCGACACACGTTGCGCTTAAGCAGGAACTGGAAGCGGCGCAACATGAGCTTCAACAAACGGATCATTTCGCGAGGAATTTGTTGATTGAGAAGGATATGCAGATGAGGGAGTTGTATGAGAAATCGGCTAAAATGGAACATGATCTTCACGGGATGGAAGGGATGCGAGCCGAGCTTATGCAAGTTCATGCTGATGTTAAGGAGTTGACTGCTACTCGTCAGAAACTTACTGCACAGGTTCAGGCTATGACCCAAGAACTTGCTAGAGCAAATGCAGATTTGCAGCAAGTTCCGGCACTTAAGTCAGAAATTGGAGGGCTTAGACAGGAACTGCAACGTGCGAGGGCTGCAATTGAACATGAGAAGAAGGGGCATGCAGAGAATTATGAGCATGGTCAAGTGATGGAAAAGAATTTACTTTCTATGGCTCGTGAGCTGGAAAAGTTGCGTGCTGAGATGGCCAATGCTGAGAAAAGGGCTCGTGCTGCTGCAGCAGCAGTTAATCCAAATCCAGGCTATAACCCAAATTATGGCAATGCTGAAGCTAGCTATGCAGGGAATTCTTATCCTACAAATTATGGCATGGGTACTACGAATCAAATGAATCCAGTACAGCCTGGTGCAGAAGCTTATCCTCAGTATGGACCTGGACCTGGATCTTGGGGCTCATATGACATGCAACGGGCTCAAGGACACAGATAG 969 49.74 MSARNRGGPPVPMAPVHEPPLFGRNRGPIPMPMPMPMPSHALLEELRESQFVHGHGHRPLPPHPAVIEERLAVQHQDIQGLLIDNQRLAATHVALKQELEAAQHELQQTDHFARNLLIEKDMQMRELYEKSAKMEHDLHGMEGMRAELMQVHADVKELTATRQKLTAQVQAMTQELARANADLQQVPALKSEIGGLRQELQRARAAIEHEKKGHAENYEHGQVMEKNLLSMARELEKLRAEMANAEKRARAAAAAVNPNPGYNPNYGNAEASYAGNSYPTNYGMGTTNQMNPVQPGAEAYPQYGPGPGSWGSYDMQRAQGHR 322
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02159 322 Coils Coil 221 255 - -
Ecan3g02159 322 Coils Coil 197 217 - -
Ecan3g02159 322 Coils Coil 85 105 - -
Ecan3g02159 322 Coils Coil 148 182 - -
Ecan3g02159 322 PANTHER PROTEIN FLX-LIKE 2 37 314 IPR040353 -
Ecan3g02159 322 MobiDBLite consensus disorder prediction 302 322 - -
Ecan3g02159 322 MobiDBLite consensus disorder prediction 1 25 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02159 K27811 protein FLX/FLXL
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:32409173 Ecan4g03518 Ecan-Chr4:43239884 dispersed
Ecan Ecan-Chr3:32409173 Ecan4g03517 Ecan-Chr4:43239884 transposed