Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02164 | ATGAGATGCAACGCGTGCTGGCGGGAGCTGGAAGGCAGAGCTATATCTACTACGTGTGGACATCTGTTGTGCAATGAAGATGCAAGTAAGATACTAAGCAATGATGCAGCTTGCCCTGTTTGTGATCAAGTTCTTTCTAAAAGTCTCATGAAACCAGTGGATATCAACCCAAACGATGAATGGATAAATATGGCTATGGCTGGCATATCTCCGCAGATACTAATGAAGAGTGCATACAGAAGCGTTATGTTCTTCATTGGACAAAAAGAACTAGAAATGCAATTCAAGATGAACAGGATAGTCGCTCAGTGCAGGCAGAAATGTGAGGCAATGCAAGAGAAGTTTACAGAAAAAATGGAGCAAGTGCATACAGCATATCAGAAAATGGCCAAAAAGTGCCAGATGATGGAACAAGAAATTGAGAATTTGTCTAAAGATAAACAAGAGCTCCAAGAAAAGTTTTCTGAGAAATCCAGGCAAAAGCGAAAGCTGGATGAGATGTATGACCAATTGAGAAGTGAGTACGAGTCGATAAAACGATCAGCTATTCAACCTGCAAACAACTTCTTCTCAAGGACAGAACCTGACTTGTTTGCCAGTCCAGCTAACATGATGGATAATAGAGATGCCATGAGGAAAGATTGGTCCGTTATCACCCCTGACACTCCAGGACCCCGGGAAGATATATGGCCACAAACAACAAGACAGAACAGTTCCAACTCTGGCCCATTTGACATCTCTGCTAGCCCACCTGCTAAACCTTCAGCAATTCCAGTTGAAACCAGAAGACCGGTTGGTCGCCCCATGTTTGGAGGTGGAGTTGGTGGTGGCGGAAGTGGAGCTAGCAATCCCTCTACAACGTTGAGAAACCTCATTTTATCACCAATGAAGCGGCCTCAGCTCTCTCGTAGCCGGCCTCAATTGTTCACGTAA | 933 | 44.37 | MRCNACWRELEGRAISTTCGHLLCNEDASKILSNDAACPVCDQVLSKSLMKPVDINPNDEWINMAMAGISPQILMKSAYRSVMFFIGQKELEMQFKMNRIVAQCRQKCEAMQEKFTEKMEQVHTAYQKMAKKCQMMEQEIENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESIKRSAIQPANNFFSRTEPDLFASPANMMDNRDAMRKDWSVITPDTPGPREDIWPQTTRQNSSNSGPFDISASPPAKPSAIPVETRRPVGRPMFGGGVGGGGSGASNPSTTLRNLILSPMKRPQLSRSRPQLFT | 310 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02164 | 310 | Coils | Coil | 126 | 181 | - | - | |
| Ecan3g02164 | 310 | MobiDBLite | consensus disorder prediction | 229 | 246 | - | - | |
| Ecan3g02164 | 310 | FunFam | E3 ubiquitin-protein ligase CCNB1IP1 homolog | 1 | 53 | - | - | |
| Ecan3g02164 | 310 | Gene3D | alix-aip1 like domains | 74 | 212 | - | - | |
| Ecan3g02164 | 310 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG | 1 | 310 | - | GO:0051026(PANTHER) | |
| Ecan3g02164 | 310 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 1 | 53 | IPR013083 | - | |
| Ecan3g02164 | 310 | Pfam | zinc-RING finger domain | 2 | 43 | IPR001841 | - | |
| Ecan3g02164 | 310 | MobiDBLite | consensus disorder prediction | 279 | 293 | - | - | |
| Ecan3g02164 | 310 | MobiDBLite | consensus disorder prediction | 221 | 310 | - | - | |
| Ecan3g02164 | 310 | SUPERFAMILY | RING-U-box | 2 | 50 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02164 | K10639 | E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:32467314 | Ecan3g02165 | Ecan-Chr3:32467314 | tandem |