Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02187 | ATGAATGCTTCCCATTTTTATTTAATTTTTTCAACAGTTATTTTCATTTACATCTTTCAGTTGGAAGCTCAAGCTGCCCCTGCTGCTGCTGGCCCAGTAATTAAACAACTATCTTCCATTTTCAAGTGGACAGCTAGGTCATCATCATCTTCTAAATCATCATTATCAGATGGGAATATTCTTCAATTTGAGGATGGTTATTTAGTAGAAACAGTAGTTGAAGGGAATCAGTTAGGGGTTGTGCCGTATTCGGTTCAGGTTTCGCAAGAAGGTGAACTATATGCTGTTGATACAGTCAATAGCAACATTGTTCGGATTACGCCCCCTTTGTCACAATATAGTAGGGCAAGGTTGATTGCGGGGTCGTTTCAAGGTTATACTGGACATGTAGATGGGAAACCGAATGATGCTCGTTTTGATCATCCTAAAGGTGTTACTATGGATGATAAAGGAAATGTGTATGTTGCCGATACTTCTAATCTTGCCATTAGAAAGATCGGTGAAACAGGTGTGACGACAATAGCTGGTGGAAAATCAAATGTAGCAGGATACAGGGACGGGCCAAGTGAAGATGCACAGTTTTCAAGTGACTTTGATGTAATTTATGTGAGACCAACCTGCTCGTTGCTAGTTATTGATCGAGGAAATGCAGCTCTTCGACAAATTTCTTTGAATCAAGAGGATTGTGATTACCAAGATAGCTCTATAACTTCCACAGATCTTGTTTTGTGTATTGGTGCCATCTTGATAGGATATGCTGTATGCATCGTTCAACAAGGATATGGCTCATCGTATTTCTCTGCAGTGCATAAGGCGGAGAGTGATACTAAAAGACCAAGCAAGGAAAAACCCACTAAAACTCAAAATGTGGAAACCATTAGAGAAGAACAAGAAGCAGGATGGCCATCTTTTGGGCAACTAGTTACGGATCTATCAAAGCTCGCCCTCGAAGGCTTTGGTAACATCTTTGTTCCATGGAACCCGTTCAACAGTCCTGGGAGAGGCCTCACCCCTTTAAAAGATCATCTTATAATGCCTGAAGATGAACTTGCTCAGCAGCCGCCATTGGTACAGAAGCACAGAACGCCAACCCCTCTTTCAGAAACCCGTCATGCCCACAATCCAAATGAAAAAATTGCAGAAACAAAGCCTGCTAAACTCAGATCATCTAGCATAAAAGATCCAAGCAAGCATAGAGTCTCTAAAAGAGAAGAATATGCCGAGTTTTATGGTGGGGCTAGTGGTGAGGTTCCTCATGTTCGATCCAAGAGCCAGAAGGAAAGAACAAAGCATCGGTCTAGAGATAAACGAGCTGAAGCTGCGTATGGAGGTGAGCAAAAGACTGTTGACCCAAAACCGGTCAACTATGATGATCCCAAGTTTAGTTATATGAGAAACAAGTTTGGTGAATCATATCGTTACAATTAA | 1428 | 41.46 | MNASHFYLIFSTVIFIYIFQLEAQAAPAAAGPVIKQLSSIFKWTARSSSSSKSSLSDGNILQFEDGYLVETVVEGNQLGVVPYSVQVSQEGELYAVDTVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKPNDARFDHPKGVTMDDKGNVYVADTSNLAIRKIGETGVTTIAGGKSNVAGYRDGPSEDAQFSSDFDVIYVRPTCSLLVIDRGNAALRQISLNQEDCDYQDSSITSTDLVLCIGAILIGYAVCIVQQGYGSSYFSAVHKAESDTKRPSKEKPTKTQNVETIREEQEAGWPSFGQLVTDLSKLALEGFGNIFVPWNPFNSPGRGLTPLKDHLIMPEDELAQQPPLVQKHRTPTPLSETRHAHNPNEKIAETKPAKLRSSSIKDPSKHRVSKREEYAEFYGGASGEVPHVRSKSQKERTKHRSRDKRAEAAYGGEQKTVDPKPVNYDDPKFSYMRNKFGESYRYN | 475 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02187 | 475 | PANTHER | - | 21 | 472 | - | - | |
| Ecan3g02187 | 475 | MobiDBLite | consensus disorder prediction | 350 | 459 | - | - | |
| Ecan3g02187 | 475 | Pfam | NHL repeat | 139 | 165 | IPR001258 | GO:0005515(InterPro) | |
| Ecan3g02187 | 475 | MobiDBLite | consensus disorder prediction | 364 | 406 | - | - | |
| Ecan3g02187 | 475 | Gene3D | - | 16 | 224 | IPR011042 | - | |
| Ecan3g02187 | 475 | SUPERFAMILY | NHL repeat | 75 | 222 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02187 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr2:6085244 | Ecan3g02187 | Ecan-Chr3:32639279 | dispersed | |
| Ecan | Ecan-Chr3:32639279 | Ecan1g00069 | Ecan-Chr1:719840 | transposed |