Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02194	ATGTCTTCTTTTACAACAACACTCTCACTAATAATCTCCTTATCCTTTCTTTCGCTATTATTCAACATCTCCACAGCGCAAGTTCCTGCCTCCGACACCTTTACCTATGTCAACGAAGGTTTTTTAAGCCAATTTGACGATGATACCGGACTACCTCTCGTTGAATACAGCGCAAGTTATCGTATACTTGAGCCAATCACCGGCATTTTCCGGCTATGTTTCTACAACACTACCCCAAATGCCTACACACTTGCTCTCCGTATGGGCCTCAGCCGCTATACCACAAGGCGATGGGTCTGGGAAGCCAACCGAGGTCGCCCTGTTCGTGAAAATGCCACCTTATCCTTAGGTTCCAATGGGAACCTGGTCCTGGCGGAATCTGATGGCCAGGTTGTATGGCAAACCAACACCGCCAACAAAGGCGTGGTTGGATTTGCCATACTAGAGGATGGTAACATGGTGCTTCGTGACTCGAAAGGAAGCTTTGTATGGCAAAGCTTCGATTCGCCAACCGACACCCTGTTAGTTGGCCAATCTCTTCGAGTCAATGGAGGTCCGTATAAGCTCGTGAGCCGGGATTCGGTTACTAACAATGTTGATGGTGTTTATAGCCTCGTAATCGAACCTAAAAGATTCGGTTTGTTTTATAAAAACATGCTTTATTGGGCAGCCCCGTTCCCCTTTTTAAGGAGAACAAATGTGAATTTGACGGAAGCAAAGTTACGAATTGCTGAAGCCGAATATGAAGGAAACGATTTTCACATACTCGACTTTACTATCACGAACGGTCGACCCATTGAAACACCGTCTTTAGATATGGGGACCCTTCTATGCAATGTCACGCAATCGTATCTCCGACTCGGCATCGATGGGAACCTAAGACTCTTCACTTATCGGCCCGTTTTGCGTTATAATGCATGGTTCGAGTTGTACACTTTGTTTGATAGAGACGTGAGTGAAGCGGACTCGACTAGCGGGTCTGGAACTGTTGTTGAAGACGAGTGCCAATTACATTATCGTTGTGGGAAGTTTGGGCTTTGTGAAAACAGTCAATGTGTTGGATGCCCGACGCCAAACGGGGTGGGTGCGTGGAGCAAGGAGTGTGACTCAAAGACACCAGGTTGTAATCCGAGTGGGTTTAAGTACTATGAGCTCAAAGGAGTTGACCATTTCACGGTTAAGTACACATCTGGAAGCGGACGGACGCCTAAGAGTAGTTGCGAGAACAGATGCACAAAGGATTGCAAGTGCCTCGGGTATTTCTATAACACAGATAGCCAGAGGTGTTGGGTTGTTAACGAGTTGGGAACATTGACACGAGTTGGGAACTCGACTCACTTGGCCTACATCAAAACACCCATCTAG	1365	46.81	MSSFTTTLSLIISLSFLSLLFNISTAQVPASDTFTYVNEGFLSQFDDDTGLPLVEYSASYRILEPITGIFRLCFYNTTPNAYTLALRMGLSRYTTRRWVWEANRGRPVRENATLSLGSNGNLVLAESDGQVVWQTNTANKGVVGFAILEDGNMVLRDSKGSFVWQSFDSPTDTLLVGQSLRVNGGPYKLVSRDSVTNNVDGVYSLVIEPKRFGLFYKNMLYWAAPFPFLRRTNVNLTEAKLRIAEAEYEGNDFHILDFTITNGRPIETPSLDMGTLLCNVTQSYLRLGIDGNLRLFTYRPVLRYNAWFELYTLFDRDVSEADSTSGSGTVVEDECQLHYRCGKFGLCENSQCVGCPTPNGVGAWSKECDSKTPGCNPSGFKYYELKGVDHFTVKYTSGSGRTPKSSCENRCTKDCKCLGYFYNTDSQRCWVVNELGTLTRVGNSTHLAYIKTPI	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02194	454	ProSiteProfiles	Bulb-type lectin domain profile.	47	168	IPR001480	-
	Ecan3g02194	454	Coils	Coil	229	249	-	-
	Ecan3g02194	454	CDD	B-lectin	54	170	IPR001480	-
	Ecan3g02194	454	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	64	452	IPR051343	-
	Ecan3g02194	454	SUPERFAMILY	alpha-D-mannose-specific plant lectins	93	223	IPR036426	-
	Ecan3g02194	454	CDD	PAN-AP-plant	376	453	-	-
	Ecan3g02194	454	SMART	blect-4	54	170	IPR001480	-
	Ecan3g02194	454	Gene3D	-	63	167	IPR036426	-
	Ecan3g02194	454	Pfam	D-mannose binding lectin	99	183	IPR001480	-
	Ecan3g02194	454	PIRSF	SLG	1	454	IPR035446	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02194	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:32706553	Ecan3g02194	Ecan-Chr3:32726003	dispersed
	Ecan	Ecan-Chr3:32726003	Ecan8g01133	Ecan-Chr8:22948045	dispersed
	Ecan	Ecan-Chr3:32717557	Ecan3g02194	Ecan-Chr3:32726003	tandem
	Ecan	Ecan-Chr3:32726003	Ecan3g02195	Ecan-Chr3:32733540	tandem