AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02196 ATGGCAAATAGGAATTTGGAGAAATTGGCATCAATTGATGCACAGTTAAGACTTTTAGTACCTGGAAAAGTTTCTGAAGATGATAAGCTTATTGAATATGATGCTTTGCTTTTAGATAAGTTTCTTGATATTCTTCAAGATTTGCATGGTGAAGATCTTAAAGAAACGGTGCAAGAATGTTATGAACTTTCGGCTGAATATGAAGGAAAGCGTGATCCAAAAAAGCTCGAGGAGCTCGGAAGTGTGTTGACAAGTTTGGATCCAGGAGATTCAATTGTCATTGCAAAAGCTTTTTCTCACATGCTTAACTTGGCCAATCTGGCTGAAGAGGTTCAGATTGCGTATCGAAGGAGGATTAAACTTAAGAAGGGTGATTTTGCTGATGAAGCAAATGCAACAACTGAATCTGATATTGAAGAAACTTTTAAGAAACTTGTGCATCAGCTTAAGAAATCCCCTGAAGAGGTTTTTGATGCACTCAAGAATCAGACAGTTGATTTGGTTTTAACTGCTCATCCGACACAATCTGTTCGTAGGTCTTTGCTCCAAAAGCATGGAAGGATTCGAAACTGTCTAGCTCAGTTGTATGCCAAAGATATCACTCCTGATGATAAGCAGGAACTAGATGAGGCTTTGGCTAGAGAAATTCAAGCTGCTTTCCGTACTGATGAGATTAAGAGGACCCCTCCAACCCCTCAAGATGAGATGAGAGCAGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGGGTTCCTAAATTCTTACGTCGTGTTGATACAGCTCTTAAGAATATCGGGATCAATGAACGTGTTCCATACAGTTCCCCTCTTATTCAGTTTTCTTCATGGATGGGCGGTGACCGTGATGGTAATCCAAGGGTTACTCCTGAGGTAACAAGGGATGTTTGCTTACTCGCCAGAATGATGGCTGCAAACATGTACTTTTCCCAGATAGAGGATCTAATGTTTGAGATGTCCATGTGGCGTTGTAATGATGAGCTTCGTGTCCGAGCTGAAGAACTCTATAGAACAGCAAGGAGAGACGTGAAGCACTACATAGAGTTCTGGAAACAGGTTCCTCCAACTGAACCTTACCGTGTGATTCTTGGAGACGTGAGAGATAAATTATATAATACACGTGAACGAGCTCGTCATCTATTAGCCCACGAGAAATCAGACATACCAGAAGAAGCAGTTTATACAAATATTGAACAGTTCTTGGAACCTCTGGAGCTATGCTACCGATCTCTGTGTGATTGTGGTGACCGTGTGATTGCTGATGGAAGCCTTCTTGATTTTTTGAGGCAAGTGTCCACATTTGGACTCTCACTTGTGAAACTTGATATAAGACAAGAATCTGATCGCCACACGGATGTCCTTGATGCTATCACTCAACATTTGGAAATCGGGTCTTATCGTGAGTGGTCAGAAGAGAAGCGCCAAGAATGGCTTCTAGCCGAGCTTGGTGGCAAACGTCCACTTTTTGGCTCTGATCTTCCTAAAACAGAGGAGATTAAGGATGTTTTGGATACATTTGCTGTTTTGGCGGAACTTCCATCGGATTGTTTTGGTGCTTACATCATTTCAATGGCCACATCACCTTCTGATGTGCTTGCTGTTGAGCTTCTTCAACGTGAATGCCATGTAAAGAAACCATTACGAGTGGTCCCACTTTTTGAGAAACTTGCAGATCTTGAGGCGGCTCCGGCTGCCATGGCTCGCCTTTTCTCAGTTGATTGGTACAAAAACCGGATCAATGGTAAGCAAGAAGTCATGATTGGATACTCTGATTCAGGAAAAGATGCTGGACGATTTACTGCTGCATGGCAGCTTTACAAGGCTCAAGAAGACCTTATTAAGGTTGCAAAGGAGTTTGGAGTTAAGCTTGTCATGTTCCATGGGCGTGGTGGGACTGTTGGTAGAGGAGGTGGTCCCACCCATCTGGCTATCTTATCCCAGCCCCCAGAAACTATTCATGGGTCTTTAAGAGTCACGGTTCAGGGTGAGGTCATTGAGCAATCTTTTGGTGAGGAACATTTGTGTTTTAGAACACTTCAAAGGTTTTGTGCAGCCACCCTCGAGCACGGGATGAACCCCCCAATTTCACCACTACCTGAATGGCGTAAACTTATGGACGAAATTGCAGTTTTGGCAACAGAACAGTATCGTTCCATTGTATTTCAAGAACCACGATTTGTCGAGTATTTCCGCCTTGCCACCCCAGAACTGGAGTATGGGCGTATGAATATTGGAAGTCGCCCATCAAAAAGAAAACCAAGTGGTGGAATCGAATCACTCAGAGCTATTCCATGGATCTTCGCATGGACTCAAACCAGGTTCCATCTTCCTGTTTGGCTCGGGTTTGGGGCAGCGTTCAAGCATGCCATTCAAAAGGACAGCAAGAATCTTAAAATGCTACAAGAAATGTACAAAACCTGGCCTTTCTTCAGAGTCACTATTGATTTAGTTGAAATGGTGTTTGCTAAAGGAGACCCAGGCATTGCTGCACTGAATGACAAGCTCCTTGTCTCAGAAGATCTATGGTCCTTTGGAGAATTGTTGAGAGCAAACTATGAAGAAACCAAGGATTATCTCCTCAAGATTGCTGGTCATAAGGACCTCCTTGAAGGTGATCCCTACTTGAAACAGAGACTTCGTCTCCGTGATTCATACATCACAACCTTGAATGTATGCCAAGCTTATACTCTTAAAAGGATCCGTGATCCAAACTACCATGTGACATTGAGACCTCATATCTCCAAAGAGTATGAGCCAAGCAAACCGGCTGATGAGCTTATCCACCTGAACCCTACTAGTGAGTATGCACCAGGTTTGGAGGACACACTCATCTTGACCATGAAGGGTATTGCTGCTGGAATGCAGAACACCGGTTAA 2895 43.39 MANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKKGDFADEANATTESDIEETFKKLVHQLKKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALAREIQAAFRTDEIKRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYSSPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCNDELRVRAEELYRTARRDVKHYIEFWKQVPPTEPYRVILGDVRDKLYNTRERARHLLAHEKSDIPEEAVYTNIEQFLEPLELCYRSLCDCGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEIGSYREWSEEKRQEWLLAELGGKRPLFGSDLPKTEEIKDVLDTFAVLAELPSDCFGAYIISMATSPSDVLAVELLQRECHVKKPLRVVPLFEKLADLEAAPAAMARLFSVDWYKNRINGKQEVMIGYSDSGKDAGRFTAAWQLYKAQEDLIKVAKEFGVKLVMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPLPEWRKLMDEIAVLATEQYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKHAIQKDSKNLKMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWSFGELLRANYEETKDYLLKIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPNYHVTLRPHISKEYEPSKPADELIHLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 964
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02196 964 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 27 964 IPR021135 GO:0005829(PANTHER)|GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0008964(PANTHER)|GO:0009507(PANTHER)|GO:0015977(InterPro)|GO:0048046(PANTHER)|GO:0048366(PANTHER)
Ecan3g02196 964 Pfam Phosphoenolpyruvate carboxylase 34 964 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 591 603 IPR033129 -
Ecan3g02196 964 Gene3D Phosphoenolpyruvate-pyruvate domain 308 443 - -
Ecan3g02196 964 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 964 IPR022805 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 168 179 IPR018129 -
Ecan3g02196 964 FunFam Phosphoenolpyruvate carboxylase 1 308 443 - -
Ecan3g02196 964 SUPERFAMILY Phosphoenolpyruvate-pyruvate domain 33 964 IPR015813 GO:0003824(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 440 460 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 167 180 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 280 295 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 631 660 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 763 789 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 589 609 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
Ecan3g02196 964 PRINTS Phosphoenolpyruvate carboxylase signature 220 236 IPR021135 GO:0006099(InterPro)|GO:0008964(InterPro)|GO:0015977(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02196 K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31]
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Event-related genes

Select Gene_1 Gene_2 Event_name
84859 Ecan3g02196 Ecan4g00991
84860 Ecan3g02196 Ecan4g02736
84861 Ecan3g02196 Ecan5g01686
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr1:39248935 Ecan3g02196 Ecan-Chr3:32775171 dispersed
Ecan Ecan-Chr3:32775171 Ecan4g01842 Ecan-Chr4:29666983 dispersed
Ecan Ecan-Chr3:32775171 Ecan4g02736 Ecan-Chr4:36922764 wgd
Ecan Ecan-Chr3:32775171 Ecan5g01686 Ecan-Chr5:30662521 wgd