Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02208 | ATGTTATCAATATCCCAACACCCATTAATCACCCTTTCTAAATTAAAAACCCAAGATTTCAAATTCTTATTATCAAAACCCCGTCTTCATAATCATCAAAAATATCCCAACAAGATTACGTACAACACTTATGGCTATAGAGACAGATACAGATATAATTCTTGTTTTTGTTCAAAGCTGGATATGGTTTCTTTTAGTTCAAGTGAAGAAGAATTCGATATGGAATTGGGCCGATTATTGCGATTATTACCGGAGGAAATGCGGCGAAAGGTTACCGAACATGAAGAGCTTCATCAATTGATTGAAGTTGTTATGGATTTGGGTCGAAAACCATTGGCTCGGTTTCCGTCTGGTGATTTCGTGTTATCGGATCATTTGATCACTGTGGATGATCTTGAACATGCTACTTCTTTGGTAGGTGATTTTGCTATTGATAATCGAGCTGGGATTAGTAGAACTTTGCATCGAATTAGTGCTATTAGAAACCGCAAAGGTGCTGTTATTGGGCTAACATGTCGTGTTGGCCGAGCTGTCTCTGGAAGTGCTAAGTTATTGCAGGATTTGGTTAAAGATGGATCTTCATTATTGCTAATTGGACCTCCAGGAGTTGGGAAAACTACCATTATCAGGGACATAGCTCGAATGCTTGCAAATGAATATAACAAACGTGTCATGATTGTTGACACCTCAAATGAAATTGGCGGAGATGGTGATATACCTCATGCAGGTATAGGTAATGCTCGTCGGATGCAAGTTCCTGATTCTGACATGCAACATAAGGTATTGATAGAAGCAGTTGAAAATCATATGCCTCAAGTCATTGTAATAGATGAAATTGGCACAAAACTTGAAGCAGCAGCTGCAAGCACTATTGCACAACGTGGGATTCAGTTAGTTGCCACTGCTCATGGTATTACAATAGAGAATTTGGTGCAGAATCCTTCATTGGAGATGCTTGTTGGAGGAATACAGAGTGTGACACTTGGAGATGAAGAAGCAAATCGAAGAGGTGTACAGAAATCAGTGCTGGAGAGAAAAGGTCCTTCTACCTTTGATTGTGCTGTGGAGATCATTTCTAGGCTCGAGTTGAGAGTTCATAGTAGTCTTGAAGCAACAGTTGATGCCATTCTTTCTGGTCGTTCCCCAAGATATCAAATTTGCAAGTTAAATGAGGGAGTGATAGATGATCCCTTACAAAGTGATTCAATTGCATATGATTCATTTGTCAAGAAGAGTGTGGATACGATCGAAGGCACAACATGGAACAATGAAAAGCTTACACCTGACAGAAAAATCTCAAAGGAATCTCAAAGTGAGATAGAGAATTCTTATGATAAACCACCGCTGTGTTTATTTCTCTATGGGGTTTCAGAGACAAGTGCAAGACATGTATTCAACCACTTAAAGATGGACTCTGCTGTTGAATATACAGAGAATATTAGCGAAGCAGATGCAATACTTGCACTACTGTCCAAAATAAAGAAAAATTCTCGGATTCAGGCTGCTGCTCACTCTAATGACATACCTATATATGTCACAAAAACAAGCTCGATGACTCAGTTGACAAAGGCCATAGAGGCATTATTGACGGATTATGATAATGATTTTGAAGATATCGAAGATGAATATTCTCAGATAAATGAATCAGAGAAGGCTGATGCTTTGGAGGAAGCCAGGATTGCCATTGAACAGGTTGTTATCCCGAAAGGAGAACCTGTAGAATTACTTCCAAGGCCATCCAATGTTATGCTTCTTCAGAAGGAACTAATTCGTAAATATAAGCTACAAGCACAAAAAGTTGGTTCCGAGGCGGATGTAAGGCTTCGTATCCTACCATTTCAAGGTCTTACAGAAGAAAAAGATCACGATGATGATGTCGATGATGATGAGTTTAGTGAGTTGTCTGAAACAAATGGCTCGCCCTACCCAGTGAATAGATTGCCCCTTCTGCCTAACTAG | 1959 | 39.46 | MLSISQHPLITLSKLKTQDFKFLLSKPRLHNHQKYPNKITYNTYGYRDRYRYNSCFCSKLDMVSFSSSEEEFDMELGRLLRLLPEEMRRKVTEHEELHQLIEVVMDLGRKPLARFPSGDFVLSDHLITVDDLEHATSLVGDFAIDNRAGISRTLHRISAIRNRKGAVIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDIARMLANEYNKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVQNPSLEMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRLELRVHSSLEATVDAILSGRSPRYQICKLNEGVIDDPLQSDSIAYDSFVKKSVDTIEGTTWNNEKLTPDRKISKESQSEIENSYDKPPLCLFLYGVSETSARHVFNHLKMDSAVEYTENISEADAILALLSKIKKNSRIQAAAHSNDIPIYVTKTSSMTQLTKAIEALLTDYDNDFEDIEDEYSQINESEKADALEEARIAIEQVVIPKGEPVELLPRPSNVMLLQKELIRKYKLQAQKVGSEADVRLRILPFQGLTEEKDHDDDVDDDEFSELSETNGSPYPVNRLPLLPN | 652 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02208 | 652 | FunFam | uncharacterized protein ycf45 isoform X2 | 156 | 373 | - | - | |
| Ecan3g02208 | 652 | Coils | Coil | 529 | 549 | - | - | |
| Ecan3g02208 | 652 | MobiDBLite | consensus disorder prediction | 619 | 652 | - | - | |
| Ecan3g02208 | 652 | SMART | AAA-5 | 191 | 322 | IPR003593 | GO:0016887(InterPro) | |
| Ecan3g02208 | 652 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 81 | 335 | IPR027417 | - | |
| Ecan3g02208 | 652 | CDD | R3H-AAA | 553 | 612 | IPR034081 | - | |
| Ecan3g02208 | 652 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 199 | 218 | - | - | |
| Ecan3g02208 | 652 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 600 | 619 | - | - | |
| Ecan3g02208 | 652 | Gene3D | - | 172 | 374 | IPR027417 | - | |
| Ecan3g02208 | 652 | Pfam | Sporulation stage III, protein AA | 170 | 321 | IPR045735 | - | |
| Ecan3g02208 | 652 | CDD | AAA | 192 | 281 | - | - | |
| Ecan3g02208 | 652 | PANTHER | KINASE-RELATED | 70 | 575 | - | GO:0009507(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02208 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr2:24228373 | Ecan3g02208 | Ecan-Chr3:32908197 | dispersed | |
| Ecan | Ecan-Chr2:38069280 | Ecan3g02208 | Ecan-Chr3:32908197 | dispersed |