Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02234	ATGGCTTCCATTCACAAATCTCTCTACATTAATGCAGTCTTCACTTTTTTCTTTGCTTTGCTATGTTCTTCTCATGCTTACAACTTCAAAATCGGTGGCAAAGATGGCTGGACTTTACATCCTTCAGAAAGCTACAATCAATGGTCTGGCAGAATGAGGTTCCTCATCAATGACACCCTCCATTTCAAGTACAACAGCGGGTCAGATTCAGTATTGGTGGTCAACAAAGGCGACTATGATAGTTGCAACACAAACAACCCCATCACCACCCTCACCGGCGGCGATTCTTTTATCAACTTGAACCGCTCAGGCCCTTTTTACTTCATAAGTGGTAACAAAACTAATTGTGATCAAGGTCAGAAGCTAATTGTGGTTGTTTTGTCACCTAAAAAGAGACTACCACCTGCCGGAGCTCCAGCTCCAGCAATGTCTTCACTAGCTCCGATAGGGTCCTCTGTTTCCGCACCACCAGAATCTGGGGCGTCTATTGCAGCTAGTCCGGTGGCTGGCCCGGATGGAGGGGCTGCTTCTCCGACCGATATGAGTGCTCCGGCACCGGCGTCGGTGGCAGCAAGACCGGCGGTTTGTGCAACATTAAGTGTGTTACTTGGCATGATACTAATATTTGGGTTTGGGTTGGTTTGTTAG	648	47.38	MASIHKSLYINAVFTFFFALLCSSHAYNFKIGGKDGWTLHPSESYNQWSGRMRFLINDTLHFKYNSGSDSVLVVNKGDYDSCNTNNPITTLTGGDSFINLNRSGPFYFISGNKTNCDQGQKLIVVVLSPKKRLPPAGAPAPAMSSLAPIGSSVSAPPESGASIAASPVAGPDGGAASPTDMSAPAPASVAARPAVCATLSVLLGMILIFGFGLVC	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02234	215	MobiDBLite	consensus disorder prediction	158	183	-	-
	Ecan3g02234	215	Pfam	Plastocyanin-like domain	37	120	IPR003245	GO:0009055(InterPro)
	Ecan3g02234	215	Gene3D	-	25	131	IPR008972	-
	Ecan3g02234	215	FunFam	Early nodulin-like protein 1	26	131	-	-
	Ecan3g02234	215	CDD	OsENODL1-like	27	127	IPR041846	-
	Ecan3g02234	215	PANTHER	BLUE COPPER PROTEIN	18	148	IPR039391	GO:0009055(InterPro)\|GO:0046658(PANTHER)
	Ecan3g02234	215	SUPERFAMILY	Cupredoxins	25	127	IPR008972	-
	Ecan3g02234	215	ProSiteProfiles	Phytocyanin domain profile.	27	128	IPR003245	GO:0009055(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02234	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	84887	Ecan3g02234	Ecan5g01733

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:33258671	Ecan5g01733	Ecan-Chr5:31143388	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ecan1g03651	.	49	137	PhytocyaNIN gene family	AT4G31840	35.955	1.45e-14	63.9
	Ecan2g00331	.	3	168	PhytocyaNIN gene family	AT5G15350	48.795	8.80e-56	171.0
	Ecan2g00329	.	5	138	PhytocyaNIN gene family	AT5G15350	52.518	2.28e-47	152.0
	Ecan2g00330	.	5	144	PhytocyaNIN gene family	AT5G15350	52.817	3.51e-47	150.0
	Ecan2g03151	.	8	127	PhytocyaNIN gene family	AT1G48940	39.37	2.50e-27	99.8
	Ecan2g03777	ACH	12	150	PhytocyaNIN gene family	AT1G79800	41.007	1.88e-38	129.0
	Ecan2g00332	.	28	165	PhytocyaNIN gene family	AT5G15350	44.203	1.19e-36	123.0
	Ecan3g02234	ACH	9	134	PhytocyaNIN gene family	AT4G27520	53.906	1.37e-44	150.0
	Ecan3g02369	ACH	14	202	PhytocyaNIN gene family	AT3G20570	50.0	7.75e-56	174.0
	Ecan4g03083	.	18	155	PhytocyaNIN gene family	AT5G57920	47.826	2.09e-40	134.0
	Ecan4g03541	ACH	32	134	PhytocyaNIN gene family	AT1G79800	48.544	1.70e-34	119.0
	Ecan4g01340	.	12	153	PhytocyaNIN gene family	AT1G08500	43.75	2.16e-34	120.0
	Ecan5g01733	ACH	12	271	PhytocyaNIN gene family	AT5G53870	43.774	1.27e-51	172.0
	Ecan5g00284	ACH	14	158	PhytocyaNIN gene family	AT2G25060	35.762	8.42e-25	93.6
	Ecan5g02601	.	33	160	PhytocyaNIN gene family	AT1G64640	55.474	1.04e-45	147.0
	Ecan5g01831	ACH	4	188	PhytocyaNIN gene family	AT3G20570	46.114	8.72e-50	159.0
	Ecan6g00610	.	9	201	PhytocyaNIN gene family	AT1G08500	55.5	1.11e-69	211.0
	Ecan8g03308	.	5	196	PhytocyaNIN gene family	AT4G28365	43.434	8.27e-46	148.0