Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02250 | ATGGCAGCTCGGTTATTAGCATATGAGGTATCCGATCTTTGCCTTGGCAAACCTGCCCTCACCTCCCTCCCTATCTCCGCCTCCATCCACCACGCCTTAAACGCCCTCAAATCGTCTAACGACACCCACATCAGCATTTGGAACTGTGACCACAACCAGTCGGACACCACAAACGACGACCAACAACTCATCGACGAGTGTCGCTGTGTTGGAAAAATCTGCATGGCTGATATCATTTGTTATCTTTGCAAAGATGACAACATATCATTTCCTTCTACCGCACTCAAATCCCCTGTTTCGGTTTTGATGTCACATGTTAACGTTCCTTCCGTCGTGAAACATGTGGAACCGTCCTTTAGTTTGCTTGAAGCTATTGATCTTATTATTATTGATGGAGCTCAAAATCTTGTGGTGCCAATAAAAAATAAGACAAGTAAGAGAAAACAACTTCGACAATACCCAACAATCGCCCCGACCACCCATGATGGTGGTAGGGAATATTGTTGGGTCACGCAAGAGGACGTGATCAGGTTCCTTCTTAGCTCAATTGTTTTATTCTCACCAACGGCGGCTTACTCTATCGAGTCACTTGGTATCATCACAGCAGAGATCCTCACAATCAACTACCATTCTCCTGCATCAAAAGCAGCGGATGCCATTTCAAGCTCTCTAGCTGACCAAACTTCTGTTGCGGTTGTGGATGATGATGGTGTGTTAATAGGTGAAATCTCGCCTTTCACACTTAATCATTGTGACGAAATGGTCGCGGCTGCGATCACAACACTCTCCGCCGGTGATCTTATGGCCTACATAGATTGCGGTGGCCCACCCGAAGATATACTTCAGGTGGTGGAGACTAGGTTGAAAGAAAGGAACCTGGATGGAATGCTCGATTATTTGAAGAGCATTCTATACCATGACACCAATTCATCTTCTTCGGAAGATGAATTGTCATCCTCCCCGACCTCTACTGGGCCAGGGAGGTACAAAAGGTCAAACAGCTACTCTGCCCGAATAATGAGGAGGGCAGAGGCTATATTCTGTTACCCAAGTAGCTCATTGGTCGCCGTGATGATTCAAGCAATCACCCATCGCTTAAGTTACGTGTGGGTGATTGAAGATGATTGTAGTTTGGTCGGAATAGTCAGATTTTCAGGCATGTTGGAAGTTTTTCGGGAACATTTAGAGAGCATGATAAACTAA | 1203 | 45.55 | MAARLLAYEVSDLCLGKPALTSLPISASIHHALNALKSSNDTHISIWNCDHNQSDTTNDDQQLIDECRCVGKICMADIICYLCKDDNISFPSTALKSPVSVLMSHVNVPSVVKHVEPSFSLLEAIDLIIIDGAQNLVVPIKNKTSKRKQLRQYPTIAPTTHDGGREYCWVTQEDVIRFLLSSIVLFSPTAAYSIESLGIITAEILTINYHSPASKAADAISSSLADQTSVAVVDDDGVLIGEISPFTLNHCDEMVAAAITTLSAGDLMAYIDCGGPPEDILQVVETRLKERNLDGMLDYLKSILYHDTNSSSSEDELSSSPTSTGPGRYKRSNSYSARIMRRAEAIFCYPSSSLVAVMIQAITHRLSYVWVIEDDCSLVGIVRFSGMLEVFREHLESMIN | 400 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02250 | 400 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 21 | 394 | IPR050511 | GO:0005634(PANTHER)|GO:0005737(PANTHER) | |
| Ecan3g02250 | 400 | MobiDBLite | consensus disorder prediction | 309 | 331 | - | - | |
| Ecan3g02250 | 400 | SUPERFAMILY | CBS-domain pair | 5 | 181 | IPR046342 | - | |
| Ecan3g02250 | 400 | SUPERFAMILY | CBS-domain pair | 199 | 396 | IPR046342 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02250 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84897 | Ecan3g02250 | Ecan4g00891 | |
| 84898 | Ecan3g02250 | Ecan8g02386 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:33368024 | Ecan4g00891 | Ecan-Chr4:19656739 | dispersed | |
| Ecan | Ecan-Chr3:33368024 | Ecan3g03954 | Ecan-Chr3:46251784 | wgd | |
| Ecan | Ecan-Chr3:33368024 | Ecan8g02386 | Ecan-Chr8:35362484 | wgd |