Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02252 | ATGGCTCTCCAAGCTACTTCTTTTTCTGTTAACAATCTCATGGCAAAAACTACTTCATTTTCGAAAGAGTCAACCCTCTTTGGGATTTCACTTTCTGACCACATGAAAGCTGATTCCACTTCATTAACATCAAGAAACAAGATGGAATGCACCTGCAAAAAAGTGTTTAGACCACAAGCCATAGCCACCACAAGTGCACCAGCCGTGACCCGAGCAGCACCAGAGGGAAAGAAGACATTGAGAAAAGGAAGTGTCATAATCACTGGAGCTTCATCCGGTTTGGGTCTAGCCACAGCTAAATCATTGGCAGAAACAGGGAAGTGGCACGTGATTATGGCATGTAGAGACTTTCTAAAAGCAGAAAGAGCAGCTAAATCAGCTGGAATGTCAAGAGACAATTACACCGTGATGCATTTAGACCTTGCATCAATGGACAGTGTACGACAATTCGTTGCCAACTTCAAGCAATCGGGTAGACCACTAGACGTATTAGTCTGCAATGCAGCCGTGTATCAACCAACAGCCAGAGAACCGACTTTTACAGCTGATGGAATCGAGCTAAGCGTTGGAACTAATCATCTTGGTCATTTCCTTCTTTCAAGATTATTACTTGATGACATGAAACAATCCGATTACCCTTCAAAAAGGCTCATTATCGTTGGGTCAATTACCGGAAACACTAACACTTTGGCAGGAAATGTACCACCTAAGGCTAGCTTAGGTGACATGAGGGGTTTAGCCGGTGGTTTGAATGGGTTAAATAGTTCAACCATGATTGATGGAGGAAAGTTTGATGGGGCAAAGGCATATAAAGATAGTAAGATATGTAACATGCTCACAATGCAAGAGTTTCATAGGAGATATCATGAAGAAACCGGAATTACATTTGCTTCTTTATACCCCGGTTGCATTGCTACCACTGGGTTGTTTAGAGAACACATTCCTCTTTTCCGAATGTTGTTTCCTCCATTCCAAAAGTTTATTACCAAAGGGTATGTCTCTGAAGCTGAATCTGGCAAACGACTTGCACAGGTTGTGAGTGATCCTAGCTTGACAAAGTCGGGTGTGTATTGGAGCTGGAACAAAGATTCGGCTTCGTTTGAGAATCAATTGTCGGAAGAAGCAAGTAATGAGAGCAAGGCTCGCAAGGTGTGGGAGATAAGCGAGAAGCTTGTGGGTTTGGCTTGA | 1188 | 43.01 | MALQATSFSVNNLMAKTTSFSKESTLFGISLSDHMKADSTSLTSRNKMECTCKKVFRPQAIATTSAPAVTRAAPEGKKTLRKGSVIITGASSGLGLATAKSLAETGKWHVIMACRDFLKAERAAKSAGMSRDNYTVMHLDLASMDSVRQFVANFKQSGRPLDVLVCNAAVYQPTAREPTFTADGIELSVGTNHLGHFLLSRLLLDDMKQSDYPSKRLIIVGSITGNTNTLAGNVPPKASLGDMRGLAGGLNGLNSSTMIDGGKFDGAKAYKDSKICNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRMLFPPFQKFITKGYVSEAESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSEEASNESKARKVWEISEKLVGLA | 395 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02252 | 395 | NCBIfam | protochlorophyllide reductase | 81 | 395 | IPR005979 | GO:0016630(InterPro) | |
| Ecan3g02252 | 395 | PRINTS | Glucose-ribitol dehydrogenase family signature | 84 | 101 | IPR002347 | - | |
| Ecan3g02252 | 395 | PRINTS | Glucose-ribitol dehydrogenase family signature | 159 | 170 | IPR002347 | - | |
| Ecan3g02252 | 395 | PRINTS | Glucose-ribitol dehydrogenase family signature | 292 | 309 | IPR002347 | - | |
| Ecan3g02252 | 395 | Pfam | short chain dehydrogenase | 85 | 228 | IPR002347 | - | |
| Ecan3g02252 | 395 | CDD | LPOR-like-SDR-c-like | 82 | 394 | - | - | |
| Ecan3g02252 | 395 | Gene3D | - | 72 | 395 | - | - | |
| Ecan3g02252 | 395 | PANTHER | PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC | 2 | 395 | IPR005979 | GO:0016630(InterPro) | |
| Ecan3g02252 | 395 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 80 | 362 | IPR036291 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02252 | K00218 | protochlorophyllide reductase [EC:1.3.1.33] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84899 | Ecan3g02252 | Ecan8g02390 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:33377828 | Ecan8g03244 | Ecan-Chr8:42034841 | dispersed | |
| Ecan | Ecan-Chr3:33377828 | Ecan8g02390 | Ecan-Chr8:35394138 | wgd |