Gene detail

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Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02267	ATGGCAAATTCCATAGCACAGTTTCAGCTTGTAAAAGACTCATGCGATCACCTCCTGATTGCCGTTAAAGATGTGAGTGACCTGTGGCCTCTTGTCAAGGAAGGATTTGAGAAACGGCTTCCGTTTAAAAGAGCTACATTAAACAATAAAACCCATGATCCGGTGTCCGTTAATAACTTGCCAGCTGAGTTTACATTGACTACAGATTCAAGGCTCCGTGGTCAGGACCCTTTGTCCTATTGTTTTCAACAACCATATGCAACTGTGGTTCTTGTGACATGCGAGGATTTAGATGAGTTCAAGACGAGCCTAAAACCACGTCTGAAATTGAGCTTGCAAAATGATGATGAGTGGTTCATTGTATTTGTGTCCAAAGCTGCACCAGATGATGACCAAGCCACCAAAATGGCAACAAAAGTTTATGCCAGAGTTGAAGCGGATTTCAACTCTAGAAGAAGGGAAAGATGCATCAAATTTGATCTCCTTGAACCCGATGTAATTGTTTGGGATGAGTTGGAATACAAACTCATGGAATGCGTCAGAAACACTCTTGATAGACGCATCCAGTTCTACGAGGAGGAGCTTCGTAAGCTCGGTGAACAACGTTTAATGCCAGTTTGGAGCTTCTGTAATTTATTCATTCTCAAGGAAAGCCTAGCGTTCATGTTTGAGATGGCTCATCTTTATGAGGATGCATTGCGGGAATATGTTGAACTAGAATTCTGTTACTTGGATGCAGTTAAACATGCAGGTAAACATGGGGACTTTGGAGGAACGGACCATGGAGATGATCAATCTGCCATACTAAACCCTAGTAAAAAACAACTGGCACAGATTGTTCAAAATAGCTCTTTTAGGGAGTTCGAATTTCGCCAATACTTATTTGCATGTCAAGCAAAGCTATTGTTTAATCTAGACCGTCCATTTGAGGTTGCATCAAGGGGGTTTTCATTCATAGTTAGCTTCTCTGAAGCATTGGCCCTGCATGAGAGTATTTTGCCCTTTTGTTTCAGGGAAGTTTGGGTCCTAACATCGTGTTTGGAATTGGTCAAATCAACTGCTGTCCATTACAGAGATGGACCAGTGACACCGGAGATACAAAAAGAGTATTATCGTGTACAGGGGGAGTTATATTCTCTGTCCAGAGTTAAGTTCATGAGGCTTGCATATTTAATTGGGTATGGATCTGATATAGAAAGAAGTCCAGTCAACAGTGCTTTACTTAGTATGCTACCATGGCCCAAACCGGCAACCTGGCCTTCAATTCCACCTGATGCATTATCCGAGGTTCCCTTAAGAGAAAAGACGATTCTTCAAGCTACACCAAGGATCAAGCACTTCGGTATTCGGAGAGAACCGTTGCCTCTTGAACCCTCTTTTCTCCTGCACGAGACTAATCGTCGAAGACCTTCTCAGTCTGCCGGAAATCTGTTTGAATGTGTTCCATTCATTTGGCTAACGATGCGATATTCTGCCAGCTCAGGTTCAGAAGTTGAGACATTTTCTTCTCCAGAATCATCTCCTACTTCTATGTCAAGGACCACTTCTATACCGGTGAACTTTGAGAGCTCGGTTGATACCATGAGACTTGCTGAAGCTATTGTGGCTGCTGAACATGCTCTCCGTAAAACTATATCTGATCCTGGTTTGTGGAAATCATTATCATCTTTGGAGGAGTTTGAGCAAAAATATCTGGAACTATCAAAGGGTGCTGCTGACAATTATCATCTTTCATGGTGGAAAAGGCACGGGGTTGTACTTGATGGTGAAATTGCAGCCACTTTACTTAAGCACGGTAATTATGATCTAGCTGCAAAATTATACGAGAAAGTCTGTGCTCTTTACTCTGGTGAAGGATGGCAAGAGTTATTAGCAGATGTGCTTCCTAGTCTAGCCGAATGCCAAAAGTTACTTGATGATCATCCTGGTTACTTAACATCTTGTGTGAGATTGCTTTCTCTTGATAAAAGCTTGTTTTTGACCAATGAACGCCAAGCTTTTCAGTCAGAACTAGTTCGTCTGGCACACAGTGAAATGGAGGATCCTGTGCCCTTAGACGTCTCGTCTCTAATTACTTTTGCTGGAAATTACGGGCCACCCATGGAGCTGTGTGATGGGGATCCGGGCACATTGCCTGTAACTTTATGGAGCGAATTTCCTGATGACATCACTCTAGAATCACTTAGTCTTACCTTGACAGCTACCAATAATGCAGATGCACGTGTAAAGGCAATCAAGAGCTCTGATGCAACGATACTGAACACTGGGAGAAATACAATCACTCTTTCTTTGCCCCCTCAAAAACCTGGTGCGTATGTCTTGGGTGTTCTTACAGGGCAGATTGGACATTTACGATTTAGGTCTCATGGTTATTCCAGAGGCGGGCCTGCTGACAGTGATGATCTTATGAGTTTTGATAAGCCAACTAGGCCTATATTGAAGGTGTTAAACCCAAGGCCTCTTGTTGATCTTACGACTGCAGTTTCATCTGCATTGCTCTTGAACGAACCTCAGTGGGTCGGGGTTGTTCTAAAGCCAATCAATTATGCCCTCAAGGGTGCAGTTCTGCACATAGAAACTGGACCTCAGTTGAAGTTTGAGGAGTCGTGTTCTATAGAAATGGAGAAATATTCAAATGGTGATAGTGATAATTCTTCTGCTGAATCTAAAGAGTTTGCTCAACTTACTCTTAAGAACGGTAGTATAGACCTTCCAGACTGGGCAAGCAGTATATTTAGTGTTTTGTGGATTCCCTTACGCGCCATCAAGGATGGGCTATCAAGAGGAACATCTGCAGGGGAACTGTCTTCCCAAAGGTCAGGCATTATTGATGGAATGAGGACTTTAGCTCTAAAACTTGAATTTGGAGTGTCCCACAACCAGATACTAAAAAGGACAATGGCTGTTCATTTCACTGATCCATTCAATGTTATCACACGTGTAGTTAAACAGGGCAGTGACGGTGCTTTGCTTTTGCAGGTGATACTACACTCACAGGTTAAAGCCTCATTAACTATTCACGATGCTTGGTTAGATCTACAAGATGGTTTTTCTCATACTGCACAAGGTGATGGGAGACCAACATCTAACTTATTCCCGCTTGTGGTTCCAGCAACATCTAGAACGGGAATTTTGTTTGATATATCCATGGGAGCTACAACCACTGAAGATCAAGGGATAATGGTGCGTCCTGATACAGTCTTAAACGTTAAATATGACATTTCTGGCGATAGAAATATTGGATCTCATAGCCCTTTATCCCTGGCAACCAAAGTACAAGAGGATAATGTCACAAAGCTGTTGACATTTACGAGTGTTCTTGTTTTAAAACGGCCTGTATTGGAACCTTTGTTAGTAGTCGGCTTTGTTCCTCTTCCTTCAAATGGTCTTAGAGTTGGGCAGCTAATAACAATGAAATGGCTAATCGAAAGGGTGCAGTATCTTGAGGAGGAAATAATGTATGAAGTCAAAGCGAATTCAAAGAATTGGATGATTGCCGGGAGGAAACGAGGCCATGCCACGCTCTCCAGTAAACAAGGTTCAAAGATTGAGATTTCAATGTTGTGTCTACCACTAGCTGCTGGATATGTTCGTCCTCCACAACTCGACTTGCAAAACATCAACCGGGCAAATATTTGTTGCAATCCTGCTGCTCCTCATTTGGTGTGTGTCTTGCCTCCACCTCTGAGTTCGTCCTTTTGCATACCCGCATGA	3714	42.73	MANSIAQFQLVKDSCDHLLIAVKDVSDLWPLVKEGFEKRLPFKRATLNNKTHDPVSVNNLPAEFTLTTDSRLRGQDPLSYCFQQPYATVVLVTCEDLDEFKTSLKPRLKLSLQNDDEWFIVFVSKAAPDDDQATKMATKVYARVEADFNSRRRERCIKFDLLEPDVIVWDELEYKLMECVRNTLDRRIQFYEEELRKLGEQRLMPVWSFCNLFILKESLAFMFEMAHLYEDALREYVELEFCYLDAVKHAGKHGDFGGTDHGDDQSAILNPSKKQLAQIVQNSSFREFEFRQYLFACQAKLLFNLDRPFEVASRGFSFIVSFSEALALHESILPFCFREVWVLTSCLELVKSTAVHYRDGPVTPEIQKEYYRVQGELYSLSRVKFMRLAYLIGYGSDIERSPVNSALLSMLPWPKPATWPSIPPDALSEVPLREKTILQATPRIKHFGIRREPLPLEPSFLLHETNRRRPSQSAGNLFECVPFIWLTMRYSASSGSEVETFSSPESSPTSMSRTTSIPVNFESSVDTMRLAEAIVAAEHALRKTISDPGLWKSLSSLEEFEQKYLELSKGAADNYHLSWWKRHGVVLDGEIAATLLKHGNYDLAAKLYEKVCALYSGEGWQELLADVLPSLAECQKLLDDHPGYLTSCVRLLSLDKSLFLTNERQAFQSELVRLAHSEMEDPVPLDVSSLITFAGNYGPPMELCDGDPGTLPVTLWSEFPDDITLESLSLTLTATNNADARVKAIKSSDATILNTGRNTITLSLPPQKPGAYVLGVLTGQIGHLRFRSHGYSRGGPADSDDLMSFDKPTRPILKVLNPRPLVDLTTAVSSALLLNEPQWVGVVLKPINYALKGAVLHIETGPQLKFEESCSIEMEKYSNGDSDNSSAESKEFAQLTLKNGSIDLPDWASSIFSVLWIPLRAIKDGLSRGTSAGELSSQRSGIIDGMRTLALKLEFGVSHNQILKRTMAVHFTDPFNVITRVVKQGSDGALLLQVILHSQVKASLTIHDAWLDLQDGFSHTAQGDGRPTSNLFPLVVPATSRTGILFDISMGATTTEDQGIMVRPDTVLNVKYDISGDRNIGSHSPLSLATKVQEDNVTKLLTFTSVLVLKRPVLEPLLVVGFVPLPSNGLRVGQLITMKWLIERVQYLEEEIMYEVKANSKNWMIAGRKRGHATLSSKQGSKIEISMLCLPLAAGYVRPPQLDLQNINRANICCNPAAPHLVCVLPPPLSSSFCIPA	1237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02267	1237	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	11	1236	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(PANTHER)\|GO:1990071(InterPro)
	Ecan3g02267	1237	Coils	Coil	181	201	-	-
	Ecan3g02267	1237	Pfam	Trafficking protein particle complex subunit 10, TRAPPC10	1136	1207	IPR022233	-
	Ecan3g02267	1237	Pfam	Foie gras liver health family 1	581	653	IPR021773	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02267	K20307	trafficking protein particle complex subunit 10

Event-related genes

Select	Gene_1	Gene_2	Event_name
	84906	Ecan3g02267	Ecan5g01778

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Ecan	Ecan-Chr3:33512907	Ecan5g01778	Ecan-Chr5:31487018	dispersed
	Ecan	Ecan-Chr3:33512907	Ecan5g01777	Ecan-Chr5:31487018	wgd