AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02269 ATGGGGAAAAGCGGGAGAGATTGGACACAGATCTATACAATATACGGAATGGACGATTGGCACACACCGATTTTTCTATTAATCCACGCGCTTATATTTTCGGCATCATCCGTTATTTTCTTAATGTATTTCAACTGGATCTGTTACTCTTTCGAATCAATCTCGCCGTCGGTGTTTTCCACCAGTGTTGCGAGATTTGCGGCGGGTTTTACGGGTTCTGTTACCGCGCTTTCTGCTGTTTGTTTGTTTTATGCGGCTGGAAACATGTTTTACTCTTCGGTTGCGTTAAGATGGGATATGGCGCAACGTATGGTCAACGCGGTCCATGATTGGTCAACGGTGAAGACGGTTTTGGATGTTGGGTGTGGTCGTGGTATACTTCTTAACACGGTTGCGATGCAGTTGAAGAAAGAAGGAAGTTGTGGCCGGGTCGTTGGGTTGGATCGTAAGAACACGACCGTGTCAACGTTAAGGACCGCAGGTATGGAAGGGGTACAAGAGTACGTGACATGCCGTGAAGGCGATGCACGTCGTTTGCCGTTCCCGGACAACTACTTCGACGTGGTGGTGTCGGCAGGGTTCGTTCACAAAGTAGGGAAAGAATTTGGGACAAAAAGTGCGGCGGCATCGGCCGAAAGGATGAGGGTGGTGGGGGAGGTAGTAAGGGTGTTAAAAGAGGGCGGGATAGGAGTTGTGTGGGACCTAGTTCATGTTCCGGAGTACGTACTCCGGCTACAAGAATTAAAAATGGAAGACATAAGAGTGTCGGAACGAGTAACGGCGTTTATGGTGAGTAGCCACATTGTGTCCTTTCGAAAGCCTAGCCAACATGTGGTCGGACCCAATGAAGTGCGATTGGATTGGAGATTTGTCTAA 876 48.52 MGKSGRDWTQIYTIYGMDDWHTPIFLLIHALIFSASSVIFLMYFNWICYSFESISPSVFSTSVARFAAGFTGSVTALSAVCLFYAAGNMFYSSVALRWDMAQRMVNAVHDWSTVKTVLDVGCGRGILLNTVAMQLKKEGSCGRVVGLDRKNTTVSTLRTAGMEGVQEYVTCREGDARRLPFPDNYFDVVVSAGFVHKVGKEFGTKSAAASAERMRVVGEVVRVLKEGGIGVVWDLVHVPEYVLRLQELKMEDIRVSERVTAFMVSSHIVSFRKPSQHVVGPNEVRLDWRFV 291
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02269 291 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
Ecan3g02269 291 PANTHER EXPRESSED PROTEIN 1 289 - -
Ecan3g02269 291 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 91 244 IPR029063 -
Ecan3g02269 291 Gene3D Vaccinia Virus protein VP39 75 274 IPR029063 -
Ecan3g02269 291 CDD AdoMet-MTases 116 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02269 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:33527131 Ecan8g02398 Ecan-Chr8:35515251 dispersed
Ecan Ecan-Chr3:33527131 Ecan3g02269 Ecan-Chr3:33527131 tandem