AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02272 ATGCAAGTAGTCATGATGAATATCGCCACAAAATGTTTGTTGGTTTTCATGCTTGTATTTGTACCCCATATAACTGGCGAAAAGGTAACTTGTTATGATCGTAGAAGCAAGTGTTTCTTGAAGCAAATAGCATGCCCGAAAGAATGCCCGACAACATCTCCTTTAAACCCGAAACATAAAGCTTGTTATCTGGATTGTGCTTCCCCTATATGCAAGGCTCAATGTAGAAATAGGAAACCAAACTGCAACGGTCGTGGAGCAGCATGCTTGGACCCGCGTTTTGTTGGGGGAGACGACATTGTTTTCTACTTCCATGGAAAGCGTAATGAGCACTTCACTTTGGTTTCCGACAGCAACCTCCAAATCAATGCAAGATTCATCGGGCTAAGCCCAATAGGCCGATCCAGGGACTACACGTGGATCCAGGCACTTGGAGTCCTGTTCAATTCCAATACATTCTCAGTGGAGACCATTAAATCTGCTACATGGGACAATGAAGTTGACCACCTTAAGTTCACTTACAAAGGGGAAGAGTTACCGATACAAAGTGGGTATCCCGCGATATGGGAGTCTCTAAAAGGTGAGATAAAGATAGAGAGAACTTCGGAAAAGAATAGTGTTCTTATTACGCTTCATGAAATGGCGGAGATTTCAATCAATGTAGTGCCTGTGACCGAAGAAGATGATCGAATTCATAAGTATGGTAGACCTAAAGATGACTGCTTTGCTCATTTGGAAGTACAATTCAAGTTCCATGGTTTATCACCACGAGTAGAAGGGTTGCTTGGAAGGACATACCAGCCCGAGTTCAAGAATCCAGCCAAACAAGGCGTTGCAATGCCGGTTGTTGGTGGGGAAGACAAGTATAGAACCGAATCTCTATTCTCTTCAAAATGTAATTCTTGTATATACTCTAAAGTTAAAGCTTCAAATCGAGAGGTGAAGGTGATATGA 954 42.56 MQVVMMNIATKCLLVFMLVFVPHITGEKVTCYDRRSKCFLKQIACPKECPTTSPLNPKHKACYLDCASPICKAQCRNRKPNCNGRGAACLDPRFVGGDDIVFYFHGKRNEHFTLVSDSNLQINARFIGLSPIGRSRDYTWIQALGVLFNSNTFSVETIKSATWDNEVDHLKFTYKGEELPIQSGYPAIWESLKGEIKIERTSEKNSVLITLHEMAEISINVVPVTEEDDRIHKYGRPKDDCFAHLEVQFKFHGLSPRVEGLLGRTYQPEFKNPAKQGVAMPVVGGEDKYRTESLFSSKCNSCIYSKVKASNREVKVI 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02272 317 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 26 310 - -
Ecan3g02272 317 Pfam Root cap 248 304 IPR009646 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02272 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84910 Ecan3g02272 Ecan4g00834
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:33560132 Ecan4g00834 Ecan-Chr4:18835040 dispersed
Ecan Ecan-Chr3:33560132 Ecan4g00829 Ecan-Chr4:18769351 wgd