AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02275 ATGGCGGCGATGTTATCTCCGTTTCCAGCCAACTTTAACTCCTCCTCTAAAATTCTGATTACAAATCATAATTTATCATCATCTTTAGCATCAAATAAAACAGCAGCACTTCCAGTACGACACTCAATCTCCATACCTACTACTCACCATCAACATCCTTCTTCTTCTTCTTTGTTTGTTCCCGAGGTTGAAAGTGCGGTTGATTCCTTGTATCCGGAGTTCAGGTCGGTTGATAATCTTGTGGCACGGAATTCGTCTAGAGTTCTAAAAGCTTTTCAGAATGCCAGGGTTGGAGCTCATCATTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCTGGAGGCCGAGAAGCACTTGATCAAGCGTTTGCAGAAATATTTGGTGCTGAATCTGCAATTGTCCGCTCCCAGTTTTTCTCAGGAACTCATGCTATTACATGTGCTCTTTTTGCTTTCTTAAGGCCCGGCGATGAGCTTTTGGCAGTTGCTGGTGCTCCTTATGATACACTGGAGGAAGTTATAGGAATTAGGGATGGAAATGGATTAGGTTCCCTTAAAGATTTTGGAATCAGTTATCGAGAAGTTGCTCTTGCAGATGATGGAGGGCTTGATTGGGGTGCTCTTGAGCTAGCTTTAAAACCTCAGACGAAATGTGCCCTTATTCAAAGATCATGTGGGTATTCTTGGCGTAAAAGCTTAAGTGTAACTGAAATATCAAGGGCAATACAGATGATCAAGATACAAAATCCAAATTGTTTGGTTATGGTGGATAATTGCTATGGTGAATTTACTGAAGCTATTGAACCTCCAATGGTGGGTGCTGATCTTATTGCAGGGAGTTTAATTAAAAACCCTGGTGGAACAATTGCGCCATGTGGTGGATATGTTGCTGGGAAAGAAAAATGGGTAAAAGCCGCAGCAGCTCGTCTCTCAGCACCAGGTCTTGGCGTTGATTGCGGGTCAACTCCTGGTGATATTATGAGGACATTCTTTCAAGGATTATACCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGCTTACTGATTGCTGAAGTTATGTCTGCGAAAGGTTACAAGGTCCAGCCACTTCCACGAGTACCCCGTCATGACATAGTACAGGCTGTACAACTTGGAAGCCGTGAGAGGCTCCTTGCTTTTTGTGAGGCTGTACAAAGAAGCTCCCCAGTAAGCTCATACACGAAACCAATTGCTGGTTCAACACCTGGTTATGCATCGGAGGTGATCTTTGCTGATGGAACGTTCATTGATGGCAGCACCAGTGAGCTCTCGTGTGATGGGCCGTTAAGGGAGCCATTCACTGTGTTCTGTCAGGGTGGCACTCACTGGACGCAGTGGGGATTAGTGCTGGGAGAGGTTTTGAATTCATTGTAA 1398 44.71 MAAMLSPFPANFNSSSKILITNHNLSSSLASNKTAALPVRHSISIPTTHHQHPSSSSLFVPEVESAVDSLYPEFRSVDNLVARNSSRVLKAFQNARVGAHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGISYREVALADDGGLDWGALELALKPQTKCALIQRSCGYSWRKSLSVTEISRAIQMIKIQNPNCLVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSAKGYKVQPLPRVPRHDIVQAVQLGSRERLLAFCEAVQRSSPVSSYTKPIAGSTPGYASEVIFADGTFIDGSTSELSCDGPLREPFTVFCQGGTHWTQWGLVLGEVLNSL 465
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02275 465 Gene3D - 320 465 - -
Ecan3g02275 465 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 42 465 IPR009651 -
Ecan3g02275 465 Gene3D - 111 319 IPR015421 -
Ecan3g02275 465 SUPERFAMILY PLP-dependent transferases 82 453 IPR015424 -
Ecan3g02275 465 Gene3D - 59 110 - -
Ecan3g02275 465 Pfam Methionine gamma-lyase 64 463 IPR009651 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02275 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr3:33567605 Ecan3g02275 Ecan-Chr3:33567609 tandem