Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02293 | ATGTTCACCAAATTCATTTTCCGGCCATCACCCCCTTTTTCCATCGCCCTATCTCCTCCGTTGACCCCCACCATCTTCCACCACTCCACCGCCGTCACCTTCCGTCGCATCTCCGCCGCCACACCTCTTTTCACCACCCAACCGTACGGCCCCTCTTTATCCAAAGGCATAAACCCCATTTCAAAAACCCAACAAGAAACCAACAACCAAGATTCATTATCGAATTTCGACGAAGCCCACTTCACTCGGGTATACAACATCTCAGCTCTTAAAGTCAACGCAAGCCAATGCCATGTTTTAGAAAGTCAACTCCGTGGTCACTTGCTTAACTGGCCTAGAATTCGGAACATTGCGAGAGTACCCGGAGACGAAATAGACCCGGAATTGCAAAAGTATTTCGAGTCCGAAAAAGCGTTTAATGAGAACAGTTTAGATAGGAGGATTTATGGAAAGGGGGGAGGAGATGGGGAACGGTTGAGCCCGGTTTTGTATAGAGATAAGCTTGTTAAGAGTTTTGATTCAAGGGGTTTTGAAAAGTTTAGGAATTTGGCTAAGTTATCGAGACCGAAAAGGAATGGGAGAACGGAAAAGGAGACGAAAATGAGTCAAGGTAAAGAGAGTGGGAAGAATGAGTGTTATTTGGTGGAAGAGGTTTTTGAGGAAGATAGGGATGATAAGGAGGATTTGAGTCGGTTGATTGGAGACGAATATAGAGTTGGGAAGTGGAGAGGTTCGACAAGATTGTTGCTTTTGGATGAAGGGTATGCTGATAAGTCGATAGACGAGTTGCCTCAGGCGATTAAGGCTTGTTTAAAGGAATCATTATTTGAACTTGTGAGATGCAAGCTGACTTTGTTTTACACTTATTGGCAGATGAATGAGGTCTTAGAGGCTTTTCTTCCAAATGGCATGATTGTCCCTTCATCCTTTGAGACTGTTGGGCATATCATCCATTTGAACTTAAGAGACGAACACCTTCCATATAAGAAGATTATAGCAAAGCTTGAAGTTTTGGCTGGAAATCATTCCCTTGTGACGAAAGTAGTAGAGAATGGACTCCAATTTCATGTTGATTTAGCAGCAGTGTACTGGAGCTCAAAGTTGGGAACAGAGAGGCAAAGACTTCTGAATGGTTTTACACGAAGTGATGTTGTCTGTGACGTTTTTGCTGGGGTCGGTCCTTTAGCCATATCTGCAGCAAAAAAGGTTAAGCATGTGTATGCAAATGATTTAAATCCCCATGCAGTTGACTACATGGAAAGAAATTGTGTGCTCAACAAACTAGAAAGAAAGATTGAGGTTTTCAACATGGATGGCAGAAGATTCATTGATGCCATCTTTAAGAGTCAAAGCACCCGGCCCATCACACAAGTCGTCATGAATCTGCCCAAGGATGCAGCTGAGTATCTTGATGCATTCAAAGGAATATTCAGAGATCTTGACAGGAAAGAAGAGTTAACCTTGCCAAATATTCATGTCTATGGATTTTCCAAAGCTGAAGATCCTGAGTTCGAGTTTCATGAGCGGATAAGAATTGCATTGTCGGAGGTGGCCTTTGAAGTTAAAATGCATAAAGTGCGTCTTGTCGCCCCCGGAAAATGGATGTTATGTGCATCATTTGTTCTTCCTGAGAGGGTGGCATTTGCGAGCTCGATTTCAGAATTATAA | 1668 | 43.11 | MFTKFIFRPSPPFSIALSPPLTPTIFHHSTAVTFRRISAATPLFTTQPYGPSLSKGINPISKTQQETNNQDSLSNFDEAHFTRVYNISALKVNASQCHVLESQLRGHLLNWPRIRNIARVPGDEIDPELQKYFESEKAFNENSLDRRIYGKGGGDGERLSPVLYRDKLVKSFDSRGFEKFRNLAKLSRPKRNGRTEKETKMSQGKESGKNECYLVEEVFEEDRDDKEDLSRLIGDEYRVGKWRGSTRLLLLDEGYADKSIDELPQAIKACLKESLFELVRCKLTLFYTYWQMNEVLEAFLPNGMIVPSSFETVGHIIHLNLRDEHLPYKKIIAKLEVLAGNHSLVTKVVENGLQFHVDLAAVYWSSKLGTERQRLLNGFTRSDVVCDVFAGVGPLAISAAKKVKHVYANDLNPHAVDYMERNCVLNKLERKIEVFNMDGRRFIDAIFKSQSTRPITQVVMNLPKDAAEYLDAFKGIFRDLDRKEELTLPNIHVYGFSKAEDPEFEFHERIRIALSEVAFEVKMHKVRLVAPGKWMLCASFVLPERVAFASSISEL | 555 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02293 | 555 | Pfam | Met-10+ like-protein | 334 | 479 | IPR030382 | - | |
| Ecan3g02293 | 555 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 306 | 544 | IPR029063 | - | |
| Ecan3g02293 | 555 | PANTHER | TRNA METHYLTRANSFERASE | 87 | 547 | - | GO:0002939(PANTHER)|GO:0005737(PANTHER)|GO:0008175(PANTHER)|GO:0009019(PANTHER)|GO:0030488(PANTHER) | |
| Ecan3g02293 | 555 | MobiDBLite | consensus disorder prediction | 188 | 207 | - | - | |
| Ecan3g02293 | 555 | Gene3D | Vaccinia Virus protein VP39 | 350 | 542 | IPR029063 | - | |
| Ecan3g02293 | 555 | ProSiteProfiles | SAM-dependent methyltransferase TRM5-TYW2-type domain profile. | 276 | 544 | IPR030382 | - | |
| Ecan3g02293 | 555 | Hamap | tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. | 73 | 544 | IPR025792 | GO:0030488(InterPro)|GO:0052906(InterPro) | |
| Ecan3g02293 | 555 | CDD | AdoMet-MTases | 385 | 449 | - | - | |
| Ecan3g02293 | 555 | Gene3D | - | 289 | 349 | - | - | |
| Ecan3g02293 | 555 | FunFam | tRNA (guanine(37)-N1)-methyltransferase | 345 | 542 | - | - | |
| Ecan3g02293 | 555 | FunFam | tRNA (guanine(37)-N1)-methyltransferase | 292 | 356 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02293 | K15429 | tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr3:33687801 | Ecan4g02890 | Ecan-Chr4:38236946 | dispersed | |
| Ecan | Ecan-Chr3:33687801 | Ecan3g02293 | Ecan-Chr3:33687801 | tandem |