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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02335 ATGATGCGGATTAACAAAAATAACAAAAATTCGGTCGTATTGCCTCAGAAAGCCTCTTCTGACTACATTCCGCAACAGGCAAATTTGTTTGAAGGTGAAAGTCTTCTTCATCTTGTCAACTCAATTCAAAGAGAAATCAAGCAACAATTTTCAATTGGTGTCAATGATGTGACCCGTGTGCTTGAACGGATGCCGCCTCTTATTGGATCTATAAGCTCTATTCCACAAAATGCTACTTACAGCCGTCGTAATTCCAAATCTCCTCCCATCCAAATGCAGGCCATAATTATAGCTACAGACTGCAATCCTCGAGGGCTTACGAAGCACCTGCCGAGCCTGGCCTCATCTAGGGAAGTGCCAGTCATCTTTGTTAAAGATAAGAAAGGGGGATCTTTCAAGTTAGGTGAAATGGTGAATTTGAAGACGGCTATGGCAATCGGTGTCAAGGCCAGAGGAAATTCAATCAACAAACTTATTGGCGAGATTGTTGGAGATAACCAGGTAAATAAAGAGGTTACGGGGTCGTGA 528 42.61 MMRINKNNKNSVVLPQKASSDYIPQQANLFEGESLLHLVNSIQREIKQQFSIGVNDVTRVLERMPPLIGSISSIPQNATYSRRNSKSPPIQMQAIIIATDCNPRGLTKHLPSLASSREVPVIFVKDKKGGSFKLGEMVNLKTAMAIGVKARGNSINKLIGEIVGDNQVNKEVTGS 175
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02335 175 PANTHER OS07G0636400 PROTEIN 46 169 - -
Ecan3g02335 175 SUPERFAMILY L30e-like 48 162 IPR029064 -
Ecan3g02335 175 Gene3D - 31 165 IPR029064 -
Ecan3g02335 175 Pfam Ribosomal protein L7Ae-L30e-S12e-Gadd45 family 92 154 IPR004038 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02335 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2126827 Ecan Ecan3g02334 Ecan-Chr3:34017040 Ecan3g02335 Ecan-Chr3:34017040