AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02364 ATGGAAGGAGATATAATAGCAGGAATCATTTCAATGATTCTTATTGTTGCTTTGATTCCGCTTTTCCTTTGGAGACGCCGTCAGGCTGCTCATGAAGATCATGCAGAACAACCGCCACAGGTTGAACAAAGAGAAAATGTTGTAAGGCCTACTGGTGCTCGTAGTAGGATGCGTAGACGCAACACTTCGGCAGCTAGCACATCTTCTGCTCCACAAACTGTTGAAGAAACAGAAGATGGAAGTGATGAGGAAGCTGTTGAAGGGGAGTACTATAACGCAAAGACATCAAAGAAGAAAGGAAGGAAGAAAGAGGAGCGCCAAGCACAACGTCAGGCTGAAGAGGCAGCGAGGGAGTCAAGAAATACAAAACAAGATCGTTATGCAGAAATGCGCAGGAGGAAGGATGAGGAACATGAAGCAAAAGAGCGTATGCTGGAAGAAGAAGCTGCGGCTCGAAAGGCGAAGGAGGAGGAGGCTGCAGCATTAGAGTTTGATAAGTGGAAAGGAGAATTTTCAGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACCCAGGGTTTGCTTTATGATTTTGTGGAGTACATCAAGAAACAGAAATGTGTTCCCTTGGAAGATCTTGCTGCTGAATTCAAACTGCGGACTCAGGACTGTATCAATCGAATCACTGCACTAGAAGATATGGGGAGACTATCTGGTGTCATGGATGATAGAGGAAAATATATATACATTTCACATGAAGAAATGCAGGCCGTTGCAGATTATATCAAGCGTGAAGGGAGGGTCAGCATTGCTCATCTAGCCAGCCAGTCAAATCAGTTCATAGACTTGGAACCCAAAGCACAGTTTGTCGATGATTTAGTTGCTTCAGATGAGATCACCGTCGCTTGA 897 44.37 MEGDIIAGIISMILIVALIPLFLWRRRQAAHEDHAEQPPQVEQRENVVRPTGARSRMRRRNTSAASTSSAPQTVEETEDGSDEEAVEGEYYNAKTSKKKGRKKEERQAQRQAEEAARESRNTKQDRYAEMRRRKDEEHEAKERMLEEEAAARKAKEEEAAALEFDKWKGEFSVDAEGTTENEVQDGTQGLLYDFVEYIKKQKCVPLEDLAAEFKLRTQDCINRITALEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKAQFVDDLVASDEITVA 298
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02364 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 74 287 IPR050899 -
Ecan3g02364 298 MobiDBLite consensus disorder prediction 32 152 - -
Ecan3g02364 298 Gene3D - 189 246 IPR036388 -
Ecan3g02364 298 SMART DDRGK-2 93 278 IPR019153 -
Ecan3g02364 298 MobiDBLite consensus disorder prediction 57 75 - -
Ecan3g02364 298 Coils Coil 127 165 - -
Ecan3g02364 298 Coils Coil 98 125 - -
Ecan3g02364 298 MobiDBLite consensus disorder prediction 105 152 - -
Ecan3g02364 298 Pfam DDRGK domain 93 278 IPR019153 -
Ecan3g02364 298 SUPERFAMILY Winged helix DNA-binding domain 185 254 IPR036390 -
Ecan3g02364 298 FunFam DDRGK domain-containing protein 1 189 246 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02364 K23344 DDRGK domain-containing protein 1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2126836 Ecan Ecan3g02363 Ecan-Chr3:34201951 Ecan3g02364 Ecan-Chr3:34201963