Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan3g02368 | ATGATGAAAATATTCAAGAAAGACCTAGGATTATCAACTGATCATTTTTATGAAATTAGAGCTGGATGCAACACAGATGATGTTTTTGATACTAAATTTAAAATTAAGGCTGGGAAGACTCTAAGTGAGAAAAGGTGGCGTGCTGCGTTCAAAACTGGAGGTTCTCTTGATATAGGCAAGTGCCTTAACAGAATCTATCATGGAGGGATTCATCCATCGATTAGAGGAGAAGTGTGGGAGTTTTTGCTAGGTTGTTATGATCCTAAAAGCACATTCGATGAACGAGAAGAAATACGACATAGACGAAGAGAGCAATACGCTGAGCTGAAAAGATCATGCAGTAACATGTTTCCTGTTGTTGGAAGCGGAAAGTTCGTCACTGCTCGTGTTATTGCAGCAAATGGTGATCCAATTCAAGATCCCATTGTACTTTTAGGGACAAATCTTGAAAGTATTCCCCCACAATCACAAGAAAGTGTTAGTCTGAATCAAGCCACATTGGTTAATCGGGAGCATGATAAGGAAATAATACAATGGAAGCTTGCTCTACATCAAATAGGTCTTGATGTAGTTCGCACGGACAGGACACTAATGTTTTACGAGAAACAAGATAATCTGGCAAAACTTTGGGATGTTCTTGCTGTCTATGCTTGGCATGATAAAGATGTTGGTTATGGGCAAGGGATGAGTGATATATGCTCCCCGATGATTATGCTTTATGAAAATGAAGCAGATGCATTTTGGTGCTTTGAACGTGTAATGCGCAGACTGCGAGGTAATTTCAGGTGCACGGGCAACTCTGTGGGGGTTGAGGCTCAACTTGATAACTTGGCTAATGTTACTCGAGCTGTTAATCCTAAACTTCACCTTCATTTAGAGCACCTTGGTGGAGGCGGTTATCTATTTGCATTCCGGATGCTTATGGTATTGTTCAGGCGAGAATTAGCTTTTGGAGATGCATTGTACTTGTGGGAGATGATGTGGGCTTTGGAGTATAATCCCGAGCAGTTTGCATTATATGAGGGAGGTGAAACCCACAAGAAATCTGATGTAACACGAAAATTCAGACGCCAATATGGCAAGTACGCAAGAGCAAATAGAAAAAATAAGTCACGGGCCAGAGGCAAGCCTGAAACTGGCGCCCCACTTCCCTTTTCTATTTTTCTTGTAGCAAGTGTCCTCAAGGACAGGAGTGACAAGTTATTAAAAGAAGCCAGGGGGCTGGACGACGTTGTAAAGATATTGAACGACATTTCTGGCCATATGGATGCAAAAAAAGTTTGCATAGGGGCAATGAAGATTCACAAGAAGTATCTAAAAAGGAAATAA | 1329 | 41.16 | MMKIFKKDLGLSTDHFYEIRAGCNTDDVFDTKFKIKAGKTLSEKRWRAAFKTGGSLDIGKCLNRIYHGGIHPSIRGEVWEFLLGCYDPKSTFDEREEIRHRRREQYAELKRSCSNMFPVVGSGKFVTARVIAANGDPIQDPIVLLGTNLESIPPQSQESVSLNQATLVNREHDKEIIQWKLALHQIGLDVVRTDRTLMFYEKQDNLAKLWDVLAVYAWHDKDVGYGQGMSDICSPMIMLYENEADAFWCFERVMRRLRGNFRCTGNSVGVEAQLDNLANVTRAVNPKLHLHLEHLGGGGYLFAFRMLMVLFRRELAFGDALYLWEMMWALEYNPEQFALYEGGETHKKSDVTRKFRRQYGKYARANRKNKSRARGKPETGAPLPFSIFLVASVLKDRSDKLLKEARGLDDVVKILNDISGHMDAKKVCIGAMKIHKKYLKRK | 442 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan3g02368 | 442 | Gene3D | - | 267 | 442 | - | - | |
| Ecan3g02368 | 442 | SUPERFAMILY | Ypt-Rab-GAP domain of gyp1p | 48 | 291 | IPR035969 | - | |
| Ecan3g02368 | 442 | SUPERFAMILY | Ypt-Rab-GAP domain of gyp1p | 269 | 438 | IPR035969 | - | |
| Ecan3g02368 | 442 | Gene3D | putative rabgap domain of human tbc1 domain family member 14 like domains | 156 | 261 | - | - | |
| Ecan3g02368 | 442 | SMART | tbc-4 | 66 | 353 | IPR000195 | - | |
| Ecan3g02368 | 442 | Pfam | Rab-GTPase-TBC domain | 161 | 331 | IPR000195 | - | |
| Ecan3g02368 | 442 | FunFam | TBC1 domain family member 15-like | 163 | 261 | - | - | |
| Ecan3g02368 | 442 | ProSiteProfiles | TBC-rab GAP domain profile. | 69 | 331 | IPR000195 | - | |
| Ecan3g02368 | 442 | PANTHER | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN | 60 | 417 | - | GO:0005096(PANTHER)|GO:0090630(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan3g02368 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 84930 | Ecan3g02368 | Ecan5g01830 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2107924 | Ecan | Ecan3g02368 | Ecan-Chr3:34229178 | Ecan9g00767 | Ecan-Chr9:6484849 | |
| 2143071 | Ecan | Ecan3g02368 | Ecan-Chr3:34229178 | Ecan5g01830 | Ecan-Chr5:31903358 |