AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02380 ATGGTTCAGACGCTGGAAGCCATCAGGGGTGGTGGTGGTTCCATAAAAGTTGGAACCACTGGCACCATCAACGCATTAATGTCAAGGGAAATGCAGTCGGCTAAAGTTGCATCTCCAAGAGCAGTTCCATTCACAATGAAATCTCCAAAAAGAGCCTGGGAAATTAATGATCTTGCTACAGTCACCAATTCCAAAACAAACGTTCAAGCAGATGAAGCAAGTACTAGTTCCAGCAGTAGCAGCAACAATATTGGGAACGTGATCGCTGAAAAACCCGCCAGCGTTTCGCATAAAGCCAAACACCAGCATGCTAGAAGAGATAGCAGGAATCCTTTTCTTCATTCGGACAGTGTATCTGTAGATGGAAATGGAAATGGAAGTGGAACTCCTAACCGTAAAAGGAATGACAAGAAGGGATCTTGCATGGTTGAGATAGTGGATGTAAAATGTGGAGTTCCTGATAAAATGTGGGCAAATCCCATAACAAATAAACTGAAGAAACTTACTTTCTCCAAGCTTTCTGAAGCCAATGGCGTAAAGTAA 543 42.91 MVQTLEAIRGGGGSIKVGTTGTINALMSREMQSAKVASPRAVPFTMKSPKRAWEINDLATVTNSKTNVQADEASTSSSSSSNNIGNVIAEKPASVSHKAKHQHARRDSRNPFLHSDSVSVDGNGNGSGTPNRKRNDKKGSCMVEIVDVKCGVPDKMWANPITNKLKKLTFSKLSEANGVK 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02380 180 PANTHER BNAA10G09140D PROTEIN 1 176 - -
Ecan3g02380 180 MobiDBLite consensus disorder prediction 113 130 - -
Ecan3g02380 180 MobiDBLite consensus disorder prediction 64 138 - -
Ecan3g02380 180 MobiDBLite consensus disorder prediction 64 89 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02380 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2126839 Ecan Ecan3g02379 Ecan-Chr3:34286774 Ecan3g02380 Ecan-Chr3:34286774
2126840 Ecan Ecan3g02380 Ecan-Chr3:34286774 Ecan3g02381 Ecan-Chr3:34286774