AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02385 ATGGATGCTGAAGTTGAAACAAGGTTACAATCTTTTATAAGTCAGTTTCAGTCAGAGTTAGGCGTGCTTGATAGAATCATTCACAAGAATAAAAACCAACATAGAAGAAGCTCATATTTCCAATACTTGCTGAAGGTGAGGAGAGACTGTAAGCTTCTTCAAGCGACTAACCTGGAGGAAATTGTTAGTTCATGTTTTCTTGTTATCAATGGCAATCGACCGAAGCAAAAAGTGCAGCTCTTGGAAAGTTTGAAGAGAAGAAAGGGTGATGGTGGCAAACATAATTTTCTGGTGCGACTTCTGGGTGCTGCACGTCTACTTTCACAGATGGTTGAGCCTATGGTAAAGGCAGCTATAGAAATATCTACTTTGCTTGCTCGATCCTTCTTCATGGGTTTTTCCACGACTGTGTTGGCCCTGCTTGCACGTTTTCGAGTTTTGACCCAGCAAATATTACTTGACGTTGTTTCAGTATTCAACATGGTTTCATCTCTATCCCATAAGCGGCAGTCTATTAAACTGAATCAAGAAGGAATTGATGTTTTTAGGGAATATTACCCGAAAAATGAGGAAGCTGTCTTTTTGGAGTGTATCTGGGAAACTGATAAGTTCATCTTACTCGAGCGGAAGAGTGAACCGGAAAACAAACTTCCAGGGACAATAGAAAATGGTGTTGTAACTCAAGGTTTATCTGCAGTGGAGTATCAAAGTATAGAAATAATCCTTGGAGACAATGAACCAGTGGATACAATAGCGGACCGGACTCCCGAAAAAGGTACCACTCCCATCAACATGGACAGTCTTTCTTCACCGGAGGGTCTTACTAATGATTGCAAAGAAGTTGGCTGTCAAAGTGATGCAAAAGATCTTTCGGGTGTCCAATCTCCTTCCATCAAGACCCTAGGACCCGAACAGTTACCGAGCTCCAGTTTATTGGCTCCCTCAGATCCTCCAGTACCTAAACCTGAACCAAAAAAGAAAGTTGCATTTATAACTGTGAAGAGACCGCAACCTTCGAATGCTAATGACATGGCGTTTCCAAAGAAGCCAAGAGACGGGGTTAATGATGAGAAAAAGGATCCATTTTTTTGTATGCTCACTAGGGGGAGTAGTCTTTTTTGA 1122 41.62 MDAEVETRLQSFISQFQSELGVLDRIIHKNKNQHRRSSYFQYLLKVRRDCKLLQATNLEEIVSSCFLVINGNRPKQKVQLLESLKRRKGDGGKHNFLVRLLGAARLLSQMVEPMVKAAIEISTLLARSFFMGFSTTVLALLARFRVLTQQILLDVVSVFNMVSSLSHKRQSIKLNQEGIDVFREYYPKNEEAVFLECIWETDKFILLERKSEPENKLPGTIENGVVTQGLSAVEYQSIEIILGDNEPVDTIADRTPEKGTTPINMDSLSSPEGLTNDCKEVGCQSDAKDLSGVQSPSIKTLGPEQLPSSSLLAPSDPPVPKPEPKKKVAFITVKRPQPSNANDMAFPKKPRDGVNDEKKDPFFCMLTRGSSLF 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02385 373 MobiDBLite consensus disorder prediction 289 359 - -
Ecan3g02385 373 MobiDBLite consensus disorder prediction 254 277 - -
Ecan3g02385 373 PANTHER OS09G0504900 PROTEIN 3 369 - -
Ecan3g02385 373 MobiDBLite consensus disorder prediction 289 312 - -
Ecan3g02385 373 Pfam Nucleolus and neural progenitor protein, N-terminal 5 160 IPR027951 -
Ecan3g02385 373 MobiDBLite consensus disorder prediction 260 274 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02385 K27075 nucleolus and neural progenitor protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2107934 Ecan Ecan3g02382 Ecan-Chr3:34293173 Ecan3g02385 Ecan-Chr3:34318541
2123277 Ecan Ecan3g02383 Ecan-Chr3:34293173 Ecan3g02385 Ecan-Chr3:34318541