Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ecan3g02386	ATGAAAATGGTGGCTGCTTCTTTCACACCCACACTCCCAACCCACACAGCCACCATTTCCAATCCATCCTCTTCATCTTGTTCACCATTTCTGAAACCCAACTCACTTTTACAATCACCTCTTAAGAAAATCGAGCCCAGCTCACCAAACCCATTTACAGTTTCTTGTGTTCTTGCTAAAGAATCAAGGGTTCAAATGGGTTCTGCTCAAGATGATTCCTTTGCCCTCCAACGACCCGATTCGCTTGGCCGGTTTGGGAAATATGGTGGAAAGTATGTCCCTGAAACCTTGATGTATGCTCTTTCTGAACTTGAATCAGCTTTTAAAGCCCTTTCTACGGACCATCAATTCCAGGAGGAATTAGATGGGATTTTGAAGGACTATGTTGGTAGGGAAACCCCTCTATATTTTGCAGAGCGACTTACAGAACATTATAAGCGTCCTAACGGTGAAGGACCCGAAATCTATCTTAAGAGGGAAGATCTTAATCATACTGGTGCACATAAGATAAATAATGCGGTTGCACAAGCTTTGCTGGCTAAGAAGTTAGGGAAAGAGCGAATCATTGCAGAAACTGGTGCTGGGCAACATGGAGTTGCAACTGCCACTGTATGTGCACGATTTGGGTTGAAGTGTATTATTTATATGGGTGCTCAAGATATGGAAAGACAAGCCCTTAATGTGTTCAGGATGAAGCTCCTTGGAGCAGAGGTTAGAGCAGTTCATTCGGGGACAGCCACACTAAAGGATGCAACATCAGAAGCCATACGAGACTGGGTGACCAATGTGGAAACTACCCACTACATCTTGGGCTCTGTTGCAGGCCCACACCCTTACCCCATGATGGTAAGGGACTTCCATGCAGTGATTGGTAAAGAAACAAGAAGGCAGGCGTTGGAAAAATGGGGTGGAAAACCAGATGTTTTGGTTGCTTGTGTTGGTGGGGGATCAAATGCTATGGGCCTGTTTCATGAGTTTGTTGATGACAAAGAGGTTAGATTGATTGGAGTAGAGGCTGCGGGTTTTGGCCTAGATAGTGGAAAACATGCAGCAACCTTAACAAAAGGAGAGGTCGGGGTGTTGCATGGAGCCATGAGTTATCTGTTGCAGGATGACGATGGGCAAATCATTGAGCCTCATTCTATTAGTGCAGGGCTGGACTACCCAGGAGTTGGACCAGAGCACAGCTTTCTGAAAGATCTGGGTCGGGCTGAGTATCATAGTATCACTGATGAGGAAGCATTGGAAGCTTTTAAGAGACTATCGAGATTAGAGGGAATCATCCCAGCTCTGGAGACATCTCATGCACTAGCTTATCTAGAGAAACTATGCCCAACCTTACCTAATGGCACCAAAGTTGTTCTTAACTGCAGTGGCAGAGGAGACAAAGATGTTCATACGGCCATCAAGCATTTGCAGGTTTGA	1425	45.4	MKMVAASFTPTLPTHTATISNPSSSSCSPFLKPNSLLQSPLKKIEPSSPNPFTVSCVLAKESRVQMGSAQDDSFALQRPDSLGRFGKYGGKYVPETLMYALSELESAFKALSTDHQFQEELDGILKDYVGRETPLYFAERLTEHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKKLGKERIIAETGAGQHGVATATVCARFGLKCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQALEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV	474

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ecan3g02386	474	CDD	Trp-synth-B	100	467	IPR006654	GO:0004834(InterPro)\|GO:0006568(InterPro)
	Ecan3g02386	474	PIRSF	Trp-syn-beta	67	474	IPR023026	GO:0000162(InterPro)\|GO:0004834(InterPro)
	Ecan3g02386	474	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	27	-	-
	Ecan3g02386	474	Gene3D	-	130	465	IPR036052	-
	Ecan3g02386	474	Gene3D	-	85	287	IPR036052	-
	Ecan3g02386	474	FunFam	Tryptophan synthase beta chain	131	284	-	-
	Ecan3g02386	474	PANTHER	TRYPTOPHAN SYNTHASE-RELATED	68	473	IPR023026	GO:0000162(PANTHER)\|GO:0000162(InterPro)\|GO:0004834(PANTHER)\|GO:0004834(InterPro)\|GO:0005737(PANTHER)\|GO:0009570(PANTHER)
	Ecan3g02386	474	Pfam	Pyridoxal-phosphate dependent enzyme	130	459	IPR001926	-
	Ecan3g02386	474	Hamap	Tryptophan synthase beta chain [trpB].	78	472	IPR023026	GO:0000162(InterPro)\|GO:0004834(InterPro)
	Ecan3g02386	474	FunFam	Tryptophan synthase beta chain	285	465	-	-
	Ecan3g02386	474	ProSitePatterns	Tryptophan synthase beta chain pyridoxal-phosphate attachment site.	162	176	IPR006653	GO:0004834(InterPro)\|GO:0006568(InterPro)
	Ecan3g02386	474	SUPERFAMILY	Tryptophan synthase beta subunit-like PLP-dependent enzymes	79	471	IPR036052	-
	Ecan3g02386	474	NCBIfam	tryptophan synthase subunit beta	83	471	IPR006654	GO:0004834(InterPro)\|GO:0006568(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ecan3g02386	K01696	tryptophan synthase beta chain [EC:4.2.1.20]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	84935	Ecan3g02386	Ecan5g01843

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	2107936	Ecan	Ecan3g02386	Ecan-Chr3:34325709	Ecan3g04057	Ecan-Chr3:47109950
	2123278	Ecan	Ecan3g02384	Ecan-Chr3:34307547	Ecan3g02386	Ecan-Chr3:34325709
	2143074	Ecan	Ecan3g02386	Ecan-Chr3:34325709	Ecan5g01843	Ecan-Chr5:32044435