AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02392 ATGATAAAATGGATAAAACATCTACGGATCACATTTGGTGCTTCTTTTCTTTGGCTTGTTTGTTTGATTTACTTCACCCAGGGTTTTAGAGCTTTCGTGTGGACAGCAGTTTCGTACCAGTTGAAAGACAGATTGAAGCTATCACCCTCTATTTCCCAATTTGTAACATCCACGTCATTTTTTCCATGGAGCATAAAACCAGTATATGGAATCATATCGGATTGTATCCCTGTCAATGGAAAGAAAAGGATTCCTTATTTAGTCATTGCGACACTTCTCTCGCTCCTTTCATGGGTGATTCTTGGCTTTCAGGAATCCATGAGAAATTCCAAACGTCCATTCATGATCTTTTTGTTATTGCAAAATCTGGGCTCTGCAATGGCGGATGTTGTAATTGATGCAATGATTGCAGAGGCTGCTAGGAATGAAAAGGCTAAATATGCTGGTGACCTGCAGTCAATATCATGGATGGCTATGGCTCTTGGGGGAATCTGTGGGAGTTTATTTGGAGGATATGCACTTAATAACTTTCAAATGGGCGATATATTTTTGCTTTTCTCCTTCTTACCAGCTATACAACTATTTTCATGTGGTTTTGTGACGGAAAGCCCTGTTGGCAGTTCACAATTGCCTGAATTTTCTACTTCTAATGACTCTGATATAGATACTAAAACTGTATCAGATGAAGATAAAGTTTCAACCGAATCGCCTAAATCTGGTACTTTGATGAGAAAAAGAAGCCATAAACTTAGCAAGAAGACCATATCAGACATAAGTAAATATCAGATGTCTGAAAAAGCTGAATCTTTGCCTTCACAATGGTTTCAATCCTTGAAAATGGCTGGTTATTCTTTGTTCATAGCTTTTAAACGCCCAATTATCTTGAGACCAATGGCTTGGTTTTTCCTTGCGCAGGTGATTATTCCAAACCTTTCAACAGTTATGTTCTACTACCAAACAGAAGTTCTTAATTTAGAAGCTTCATTTCTGGGCACAGCACGGGTTATTGGGTGGATGGGTCTCATGCTTGGAACTTATATTTACAACCGATACTTAAAGAAGATGAAGTTACGAAAGATTCTCATGTTTGCTCATGTTACTCTGTCACTATTGACACTTCTAGATCTAGTATTGGTTTCTAGACTTAATGTTCCATTTGGCGTATCGGATGAAGTAATGGTGTTATTTGGGTCGGCTCTCTCAGATGCAGTTCATCAATTCAAGTTCATGCCTTTCCTGATCTTATCGGGACAACTCTGCCCACCTGGAATAGAAGGGACTTTATTTGCGCTTTTTATGTCCATAAATAATTTTGGGTCTACAATGAGTTCATTCGTCGGTGCTGGTTTGGCTTCAGTTCTAAACATTTCTTCTGGTTCTTTTGAGAATCTTGGTTTTGGGATTGGCATTCAAGTGATCTGCACATGTATACCAGCTGGATTTCTGTTTTTGATACCAAAGGATGCTACAGGGATATCGACATGA 1485 38.79 MIKWIKHLRITFGASFLWLVCLIYFTQGFRAFVWTAVSYQLKDRLKLSPSISQFVTSTSFFPWSIKPVYGIISDCIPVNGKKRIPYLVIATLLSLLSWVILGFQESMRNSKRPFMIFLLLQNLGSAMADVVIDAMIAEAARNEKAKYAGDLQSISWMAMALGGICGSLFGGYALNNFQMGDIFLLFSFLPAIQLFSCGFVTESPVGSSQLPEFSTSNDSDIDTKTVSDEDKVSTESPKSGTLMRKRSHKLSKKTISDISKYQMSEKAESLPSQWFQSLKMAGYSLFIAFKRPIILRPMAWFFLAQVIIPNLSTVMFYYQTEVLNLEASFLGTARVIGWMGLMLGTYIYNRYLKKMKLRKILMFAHVTLSLLTLLDLVLVSRLNVPFGVSDEVMVLFGSALSDAVHQFKFMPFLILSGQLCPPGIEGTLFALFMSINNFGSTMSSFVGAGLASVLNISSGSFENLGFGIGIQVICTCIPAGFLFLIPKDATGIST 494
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02392 494 CDD MFS-FBT 18 483 - -
Ecan3g02392 494 NCBIfam folate-biopterin family MFS transporter 19 487 IPR004324 GO:0016020(InterPro)
Ecan3g02392 494 SUPERFAMILY MFS general substrate transporter 17 484 IPR036259 -
Ecan3g02392 494 MobiDBLite consensus disorder prediction 208 243 - -
Ecan3g02392 494 Pfam BT1 family 27 487 IPR039309 -
Ecan3g02392 494 Gene3D MFS general substrate transporter like domains 14 484 IPR036259 -
Ecan3g02392 494 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 6 489 IPR039309 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02392 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2107940 Ecan Ecan3g02392 Ecan-Chr3:34347251 Ecan7g01465 Ecan-Chr7:24229419