AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan3g02395 ATGGCAGCACCCCTGTTCTCATTTATCCTAAAGCCCCACCTCAAAATCACAATTATCTTGATATGTATATGTATCTATAGTCCAAAGATACAAGCTTTTAAAGCACCTATGTATCCACAAGACATACTCCCACTTTTGCCCAGACAAATTTCTTGGCCTATTCTTAATTCACTTAGAGGTGCTGCTGATCTCCTTCCTAGTTTTGTGGGTGCCGCTTCGATAGCGAATAATTCGGGTTTGAGTTGGAAAGGTTCTTGCTTTTATGAGAATACTGCTTGGTTAGAACTTCATAATAAAAGTGGTAGTCAATTTGGTGGTGGTACTCTTCATATTCAGGTAAGCAAGGCACATAGCTATACATGTATGGATATTTATGTATTTGCTACTCCATATCGTGTAACATGGGACTATTATTTTCTATCGCGTTCACATACTCTCGAGTTTGATGAGTGGGAATCGAAAGCCGAGTATGAATATGTAAAACGTAAGGGCATCGCTATTTTCCTTATGGAAGCAGGGATGATAGGGACCCTACAAGCATTATGGGAGGTCTTCCCCCTGTTCACAAATACTGGATGGGGTGAGAGTTCTAATATTGCTTTTCTCAAGAAACATATGGGAGCTAACTTTGAAGCACGTAGCGGACCACTGGTTACAAACATTACTGAAGAGGATATACACTCGGGAGACTTTCTTGCAATATCAAAAATTCGTGGTCGATGGGGCGGGTTCGAGAGCCTTGAGAAATGGGTATCCGGGGCATATGCAGGTCATTCGGCTGTTTGCTTGAGGGATCCAGAAGGGAAATTGTGGGTTGGGGAATCTGGACATGAAGATGAAGAGGGTCAAGATATTATCGTTTTGATGCCATGGGATGAATGGTGGAACTTTGAGCTGACTGAAGATGATGCTGATCCGCATATTGCGTTACTTCCTTTGCATCATGAACTTCGGTCTAAATTCAATGAAACTGCTGCGTGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTATCATAATTTGATATTTAGCTGGATAGACACTGTCAGTGATAATTATCCACCACCTTTGGATGCTAATCTGGTTGCTTCTGTTATGACTGTGTGGAACCAACTGCAGCCTGCATATGCAAGTAACATGTGGAATGAGGCGTTGAATAAGCGGCTTGGTACCAAGGGGCTTGAACTTCCTGATATTTTAGTTGAAGCAGAGAAACGTGGTTCATCTTTCGCTGAATTGCTGACTATACCCGAACAGGATGACTGGGTATATGCTGATGGAAAATCAACTTCTTGTGTGGCTTTCGTCCTTGAAATGTACAAGGAGGCAGGACTCTTTGGAGATCTTGCAAATAAAATTCAAGTAACTGAGTTCACGATAAAGGATGCTTACTCTCTGAACTTCTATGAAGATGATTTGAGTCGCCTGCCAAAATGGTGTAATGGAGACACAGTTGAACTTCCATTCTGTCAAATCAAAGGGAAGTATCGAATGGAACTACCTGGATATAACACTATTGAACCATATGCTCATATGACTGAAAGATGCCCGTCACTGCCACCGGATTATTTAAGGCCAGAGTACTGCTGA 1596 42.04 MAAPLFSFILKPHLKITIILICICIYSPKIQAFKAPMYPQDILPLLPRQISWPILNSLRGAADLLPSFVGAASIANNSGLSWKGSCFYENTAWLELHNKSGSQFGGGTLHIQVSKAHSYTCMDIYVFATPYRVTWDYYFLSRSHTLEFDEWESKAEYEYVKRKGIAIFLMEAGMIGTLQALWEVFPLFTNTGWGESSNIAFLKKHMGANFEARSGPLVTNITEEDIHSGDFLAISKIRGRWGGFESLEKWVSGAYAGHSAVCLRDPEGKLWVGESGHEDEEGQDIIVLMPWDEWWNFELTEDDADPHIALLPLHHELRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWNQLQPAYASNMWNEALNKRLGTKGLELPDILVEAEKRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLANKIQVTEFTIKDAYSLNFYEDDLSRLPKWCNGDTVELPFCQIKGKYRMELPGYNTIEPYAHMTERCPSLPPDYLRPEYC 531
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan3g02395 531 Gene3D endopeptidase domain like (from Nostoc punctiforme) 225 397 - -
Ecan3g02395 531 PANTHER OS01G0793500 PROTEIN 15 531 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan3g02395 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
84937 Ecan3g02395 Ecan8g02456
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2107941 Ecan Ecan3g02395 Ecan-Chr3:34360619 Ecan4g02144 Ecan-Chr4:32463320
2143723 Ecan Ecan3g02395 Ecan-Chr3:34360619 Ecan8g02456 Ecan-Chr8:36022320