Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan6g01214 | ATGGTAATGAAGCCTGCATGGTTAGAAGGACTAATGGGAGAGAGCTTCTTTGGGATATGTGGAATTCATGAGCACAAAAGGAAAAATGAAAAGAACATATTTTGCTTAGATTGTTGTCAAAGCTTTTGCCCTCATTGCCTTCCTTCTCATCACTCTCATCCCATTCTTCAGGTGAGAAGATATGTTTATCAGGATGTTGTTAGATTAGACGATCTCGAAAAGCTCATTGACTGCTCCTTTGTTCAGTCATATACAATAAACAGTGCAAAGGTGATATTCTTGAACCAAAGGGCACAAACAAGGTCATGCAAGGGCCCTGCCAATTCATGTTTGACCTGTGACAGGATCCTACAAGAGCCATTTCACTTTTGTTCACTATCTTGCAAGGTTGATCACATGGTGCATCAAGGAGAAGATTTGTCTAGTGTTTTGTGTAGGTTTGATGTGACCGATTTTTCCTTCTCCCAATTTGAAGGACTTCAAATGTATGGTTCTGAGTTTGTTGATGAGGATACCCCAAACTACATCCTTGAGGACTCCTTGCAGTTCAAAGACTCGTCGGGCTCTGATGATTACTCTGGCATTTCAAGGATTTCGTATAAACCAGAGATCGAGACAAAGAAGAAGAAGAAAAACAAAGACTACCTTCCTAAATTCTTTTCTTTTAGTAACAGAAGAAAGGGAGCTCCCCAAAGATCACCACTTTCCTAA | 711 | 40.23 | MVMKPAWLEGLMGESFFGICGIHEHKRKNEKNIFCLDCCQSFCPHCLPSHHSHPILQVRRYVYQDVVRLDDLEKLIDCSFVQSYTINSAKVIFLNQRAQTRSCKGPANSCLTCDRILQEPFHFCSLSCKVDHMVHQGEDLSSVLCRFDVTDFSFSQFEGLQMYGSEFVDEDTPNYILEDSLQFKDSSGSDDYSGISRISYKPEIETKKKKKNKDYLPKFFSFSNRRKGAPQRSPLS | 236 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan6g01214 | 236 | Pfam | PLATZ transcription factor | 59 | 130 | IPR006734 | - | |
| Ecan6g01214 | 236 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 3 | 235 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan6g01214 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr4:22984255 | Ecan6g01214 | Ecan-Chr6:23121713 | dispersed | |
| Ecan | Ecan-Chr4:39524786 | Ecan6g01214 | Ecan-Chr6:23121713 | dispersed | |
| Ecan | Ecan-Chr5:44513602 | Ecan6g01214 | Ecan-Chr6:23121713 | dispersed | |
| Ecan | Ecan-Chr6:23121713 | Ecan8g03934 | Ecan-Chr8:47054953 | dispersed | |
| Ecan | Ecan-Chr6:23121713 | Ecan5g00339 | Ecan-Chr5:3485811 | transposed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ecan | PLATZ | 3.7e-28 | No_clan | TF | PLATZ |