Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan8g02654 | ATGTTGAACGGATTGAAGACGAAAAGCAGGACCAGCCCATATGTTCACCTAGATTACATTATCAATCTTCTAGAGATTAAGCCGTGGCCTCCATCCAAGTCACTGAGATCTCTTCGGTCTGTATTAATACAATGGGAACACGGTAACAAGAGTTCAGGGTCTACTAAAGCAGTTGTTCCGTCGAATAGTTTTGGTTTGGGTACTGATGATGGTAAAATTGAATTTAATGAATCTTTTAGACTTCATGTAACATTGTCAAGAGACATGTCAGTCAAGTCCGCAGAGTATGATACATTTGTAAAGAATTGCATAGAGTTTAATCTGTATGAACCACGAAGGGATAAAACCGTAAAAGGGCAGTTGTTGGCTACTGCAGTTATAGACTTTGCAGAGTATGGTATTGTTCAAGAGTGTTTGATGATCAGTGTACCTATGAATTGCAAAAGGACTTTTGGTAAGACGGCTCAACCTATGCTCTTTGTTAAAATGCAAGTGGCTGAGAAAAATAATCTTGCAAGGTCTTCATCGACTATAGAGAGTTTATTCAGAGAAGAATCATTGGAGAAGAACCACTCTGAATCTGTTTCCGCATTGATGGATGAAGAGTATGCTGAGGAAGCCGAGACTGTATCTATGACAGATGATGACGACGTTTCCTCTCAGTCTTCTATCGTTGCAGGTTTATCGCTGTTTGGATCCAATGGAAGTTTAACTCCCCCAAGAGAGAATATGTCTGAAGCTATATGTGGAAGACCGGGAAAGGTTAATGATCAAGAAATCTCGGTTCGAGATAAAAGGGCTGCTTATGAAGAACGTATATCATCATCAAAAGATTTGTATTCCGAGATAGAAAATGCTCGTACCACTTTATCAAATCTCCGTAACTCAAGATTCACGATGCTCTCACAAAATGCTGAATCTCATAGCATGAAACTCTTAAAGTCATCTATCGATAGTAATGGAACAGACGAACAGTCTTTTACACAATCCAAAAAGTTGGATGCAAGTCATACTGGTCAAGAAAGTCAAATAATTAAAGATAATGGACGTGATACCGATAGGTTAGACAATGTGAAGTCTGTCAGTTCTTCGTTGGATGCAATAAATAACATCGGATCTATAAGGACAAGTAATGTAATAGCAAACAACGGATCTTTAAGGACAAGTAAAATTTTAGAGAAATTTAAAAATGCTAGTGTTCAAGAACAGAAAAGTCTAAGAAAAGACGTAAGCAAGGTACAAGACTTGGAAAGGAGAGTACAAGCTCTTGAAGGTGAACTGACAGAAGCTGCAGCTATAGAAGTTGGTCTATACTCAATAGTACCTGAGCATGGGAGTTCAATCAATAAAGTCCATTCTCCTGCAAGGCGTCTCTCCAGGCTGTACCTTCATGCATGTAAAGAGAACTCATTAAGGAGAGCTAGTTCGGCGAAAAGTATAGTGTCAGGTCTGATTTTGGTTGTAAAGGCTTGTGGAAGCGATGTTCCAAGGCTGACTTTCTGGTTGTCAAATTCTGTTGTACTAAGAGCAATATTATACAAGTCTTTAAATGGGAGTGAAGGTGAGGACCCTCATATGGTCATTTCCGCTCTTGAAAAAGTTGAATCTTGGATCTTCTCGCGCATTATTGAGTCCATCTGGTGGCAGACATTTGCCCCTTATATGCATTCCGCTGCTGCAAAGGGAATTGCTAGAGTTGTAGAGTCAGAATCTAATAAACATCGTCAAACACCTGATTCACTTGATCACGAGCAAATGAACACTTCATTAGAGCTTTGGAAAACGGCTTTCATGGATGCTTGTGAAAGAATCTGTCCGGTTCGATCTACAGGACATAGTTGTGGTTGCTTGAGTGTGCTGTCTATGTTGATAATGGAGCAATGCGTGGGTAGATTAGATGTAGCCATGTTCAATGCCATTCTTCGTGAACCAGAAGATGAGGTTCCAACAGACCCTTTATCAGATCCCATCAGTGATTCCCGTGTTCTTCCTATTCCTTCAGGGAAAGCGAGCTTTGGAGCCGGTGCACAACTGAAAAAGACGATCGGAAACTGGTCTAGTTGGTTAACCGATCTCTTCGGCTCACCAATCACTTTTCATCTCCTTACTTCACTGAGTGAGCTCATGATGCTTCCAAAGGATATGCTCTTAAGCAATACGATCCGAAAAGAGGTATGTCCTACTATTGGTATACCATTAATAAAGAGGATTGTTGATAGTTTCGTCCCGGATGAGTTTTGCCCCGACCCGATACCTGAGGTGGTGCTAGAAATACTGTATTCAGAGGATTTGATCGAGAGTAGTGAAGATTGTGTCAGAAGTCTTCCATGTGCAGCAACTCCTACTGTATATCACCCTCCTTCTGCATCTTTGATAGGATGCATCTTAGGAGATGATGGAAGCCAGGCTAGATTGTCACGCAGCGGATCATTGACCTTAAGAAAGTCAAATACAAGTGATGATGAGCTTGATGAACTGGATTTACCTTTGACTTCTATCATTGACTCTCCCAGGACAGTAACCTCTTCAACTAAGCACATGTGGACATTAAAAGATATTGATAGTTGCAATACTGTTAGGTATCGACTCCTTAGACAAGTATGGTTGAATTGTGATTAA | 2619 | 40.51 | MLNGLKTKSRTSPYVHLDYIINLLEIKPWPPSKSLRSLRSVLIQWEHGNKSSGSTKAVVPSNSFGLGTDDGKIEFNESFRLHVTLSRDMSVKSAEYDTFVKNCIEFNLYEPRRDKTVKGQLLATAVIDFAEYGIVQECLMISVPMNCKRTFGKTAQPMLFVKMQVAEKNNLARSSSTIESLFREESLEKNHSESVSALMDEEYAEEAETVSMTDDDDVSSQSSIVAGLSLFGSNGSLTPPRENMSEAICGRPGKVNDQEISVRDKRAAYEERISSSKDLYSEIENARTTLSNLRNSRFTMLSQNAESHSMKLLKSSIDSNGTDEQSFTQSKKLDASHTGQESQIIKDNGRDTDRLDNVKSVSSSLDAINNIGSIRTSNVIANNGSLRTSKILEKFKNASVQEQKSLRKDVSKVQDLERRVQALEGELTEAAAIEVGLYSIVPEHGSSINKVHSPARRLSRLYLHACKENSLRRASSAKSIVSGLILVVKACGSDVPRLTFWLSNSVVLRAILYKSLNGSEGEDPHMVISALEKVESWIFSRIIESIWWQTFAPYMHSAAAKGIARVVESESNKHRQTPDSLDHEQMNTSLELWKTAFMDACERICPVRSTGHSCGCLSVLSMLIMEQCVGRLDVAMFNAILREPEDEVPTDPLSDPISDSRVLPIPSGKASFGAGAQLKKTIGNWSSWLTDLFGSPITFHLLTSLSELMMLPKDMLLSNTIRKEVCPTIGIPLIKRIVDSFVPDEFCPDPIPEVVLEILYSEDLIESSEDCVRSLPCAATPTVYHPPSASLIGCILGDDGSQARLSRSGSLTLRKSNTSDDELDELDLPLTSIIDSPRTVTSSTKHMWTLKDIDSCNTVRYRLLRQVWLNCD | 872 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan8g02654 | 872 | Coils | Coil | 276 | 296 | - | - | |
| Ecan8g02654 | 872 | MobiDBLite | consensus disorder prediction | 317 | 343 | - | - | |
| Ecan8g02654 | 872 | MobiDBLite | consensus disorder prediction | 317 | 356 | - | - | |
| Ecan8g02654 | 872 | PANTHER | NUCLEAR PORE COMPLEX PROTEIN NUP205 | 12 | 868 | IPR021827 | GO:0005643(InterPro) | |
| Ecan8g02654 | 872 | Coils | Coil | 406 | 433 | - | - | |
| Ecan8g02654 | 872 | ProSiteProfiles | C2 NT-type domain profile. | 7 | 167 | IPR019448 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan8g02654 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 83771 | Ecan2g00687 | Ecan8g02654 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr2:7998840 | Ecan8g02654 | Ecan-Chr8:37505656 | dispersed | |
| Ecan | Ecan-Chr8:37505656 | Ecan8g03521 | Ecan-Chr8:44030631 | dispersed | |
| Ecan | Ecan-Chr8:37505616 | Ecan8g02654 | Ecan-Chr8:37505656 | tandem | |
| Ecan | Ecan-Chr8:37505656 | Ecan8g02655 | Ecan-Chr8:37505718 | tandem |