AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02660 ATGGCAGCTATGGCTAATTCCCTACCTTCCTTGAATTTGGCCCTTACCAAATCATCATCATCATCATCATCTTCCTATTCTTCTGCACCCTTCTGTTTCGCCACGAATCCCACAAGTTATAAGTTTGGAGCATTGAAGAAGCAGCAAAAAGGAATTCAGATATCTGTTTGTAAAGCATCGGCAGCAGCAGGAAGTACATTTGCGTTGTCGACGTTTCGTGATCTTGACGCCGATGACTTTAGACATCCTCTTGACAAACAGAACACGCTGCTTTTGCGGGCAATTCCGGGTTTGAACGAGATTGGAAAAGCTCTGCTAGGAACCATTGCAGAACAGGTCATGGTACTTGAAAATATCGGAACCTCTGTTCTTGTATCTGAAAATCAGCTTTCAGAACTTCATCAGTTAATGGTTCAGTCAGCAGAAGTACTGAAAATTGAAGCTCCTGACCTGTATGTGCGTCAAAGTCCAGTACCTAATGCGTATACTCTAGCCATCAATGGTAAAAAGCCATTTGTTGTTGTTCATACAAGCCTTATTGAGCTTCTTTCAAGAAAGGAATTACAGGCTGTTTTGGCTCATGAGCTAGGACACCTTAAGTGTGATCATGGTGTATGGTTGACGGTTGCAAATATTCTTACCGTTGGAGCCTACACTATACCTGGCATCGGAGGTATGATAGCTCAGAATTTAGAAGAACAACTATTTCGCTGGCTCCGAGCTGCAGAGCTTACCTGTGATCGGGCTGCCCTTCTTGTTGTTCAAGATCCCAAGGTGGTCATCTCTGTTTTAATGAAACTCGCTGGAGGATGCCCATCTTTAGCCGATCAATTGAATGTGGATGCTTTTCTGGAGCAAGCCAGATCTTATGACAAAGCATCTGCAAGCCCAGTAGGATGGTACATAAGAAATGCACAGACTAGACAACTTTCACATCCCCTTCCTGTACTAAGAGCTCGTGAGATTGATGAGTGGTCAAGAAGTCCAGATTATAAATCTCTTATGAAACGGGCAGTTATTACGACCCCTTAG 1032 43.51 MAAMANSLPSLNLALTKSSSSSSSSYSSAPFCFATNPTSYKFGALKKQQKGIQISVCKASAAAGSTFALSTFRDLDADDFRHPLDKQNTLLLRAIPGLNEIGKALLGTIAEQVMVLENIGTSVLVSENQLSELHQLMVQSAEVLKIEAPDLYVRQSPVPNAYTLAINGKKPFVVVHTSLIELLSRKELQAVLAHELGHLKCDHGVWLTVANILTVGAYTIPGIGGMIAQNLEEQLFRWLRAAELTCDRAALLVVQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKASASPVGWYIRNAQTRQLSHPLPVLRAREIDEWSRSPDYKSLMKRAVITTP 343
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02660 343 CDD M48-Ste24p-like 119 324 - -
Ecan8g02660 343 FunFam Peptidase M48 family protein 123 211 - -
Ecan8g02660 343 PANTHER CAAX PRENYL PROTEASE 1 66 331 - GO:0004222(PANTHER)|GO:0030176(PANTHER)|GO:0071586(PANTHER)
Ecan8g02660 343 Gene3D Metalloproteases (zincins), catalytic domain 123 211 - -
Ecan8g02660 343 Pfam Peptidase family M48 131 325 IPR001915 GO:0004222(InterPro)|GO:0006508(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02660 - -