AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02679 ATGAGAGCACTAAGTTGGATACACCGAAGATTTGGGCATAACAACGAACCAAGCAGAAATGTTTCCACTGGGAAATCTACTTCTTGTTTCTCAATACTATGGGAGCTTGACGAGCAACAACATTATACCCAAACTAATAATTCTGCACACTTAAGGCACCCAAGAGCATTTTCAGAATCACCAACTGCACTTCAAGCATTTGGATTGGAGAAAGTGAATGCAGAGGAAACGGCTGAATTGACCCCTGAGTTCTTTCACGGATTTCTTGCAATTGGGACTCTGGGTTATGCATCAATTACTGAAAAGGCCATAACACCAAAAGATGCAATGCCATTTGAAATTGTAACCGAAAAAGAAACCAGTGCAGCAGCGAATGAATTGCAGGGTCTGAATAAGAATTTTGATAAGCTAACTGAAAAGGAAGTACATGATGCAAGGAATATATCATCCAATGGCTTGAATATGGAAAAAAGCAATTATACCACGGTGAAAGATTATTCTGAAACAGCTGCAACCAAAGAAGAGTTAAAGAAACATAGAACCAAACCTGATAACCTTTTCAAGAAAAAAGTCACATCCTGCAAAAAATTAGACTTTATGAATAAAATGCTAAAAATGCTTGATTTCTCATCACAGTGCATCCCAACTTCTTCTACTAAGGCTACTATTTGTGATTCAATTGAGAAGAAATCCACTAAGGTCTTTCGTAAATCAAAAAAAATCCACCCCGAAGCAACTGAAATGGATGACACAAAATCAAACCGCTATGAAGTCAAGAAGATGTTTATAGATGAACGCTATGATCATGACATGCCATCAGACAATGAAGACAACACATCTCCTCAAGCTCAAATATTAAAAAAAGATACACTTAGCAGCCAGATAGCTGGAAAAAAAGCACGCTGGATTAAAACTGACGCAGATTATTTTGTGCTGGAGTTTTAG 945 37.57 MRALSWIHRRFGHNNEPSRNVSTGKSTSCFSILWELDEQQHYTQTNNSAHLRHPRAFSESPTALQAFGLEKVNAEETAELTPEFFHGFLAIGTLGYASITEKAITPKDAMPFEIVTEKETSAAANELQGLNKNFDKLTEKEVHDARNISSNGLNMEKSNYTTVKDYSETAATKEELKKHRTKPDNLFKKKVTSCKKLDFMNKMLKMLDFSSQCIPTSSTKATICDSIEKKSTKVFRKSKKIHPEATEMDDTKSNRYEVKKMFIDERYDHDMPSDNEDNTSPQAQILKKDTLSSQIAGKKARWIKTDADYFVLEF 314
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02679 314 PANTHER PROTEIN LAZY 1 1 313 IPR038928 GO:0009630(InterPro)|GO:2000012(InterPro)
Ecan8g02679 314 Coils Coil 120 140 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02679 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr8:37713844 Ecan8g02679 Ecan-Chr8:37726643 proximal
Ecan Ecan-Chr8:37726643 Ecan8g03501 Ecan-Chr8:43882128 wgd