AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan8g02687 | ATGGCGGATCATGATACACCTCCGCCAGATACCGCCATTATCACCGATGATCATCAAAATTCACAACTTAACAACCAACATTCATCGATTGATCATCTTTACGAAAAACTAGATCAATTTACGTCCGTACTATTGACATGTACGGATGATCAACCTCCTGAAATTGTGGATTCTGTTCATCACTTTGCTGATCTTTTCGACGTTAAAGTCGTTGAATATGAATCCGGATCCAAAAAATGGATCGAGGATGAATGTAATTCATCGTTTATCGAATCCGTGGATCAAACCGGAAAGCTGTTGAAATCATTTTCTAGATTTCATGCACACGAAAACTACGCGAACGTTGTGAACCGGATCAGCGGCATACAACAACGCGCATTGTCGATAATGGAGGTCGAGTTTAAGACGATTCTTGACGATTATCAGACGTCGTACGAGAGAGATCAACAAAGAAACAATGATGATGATCGGGAGGCAGAGAAGACGAAACAGAAACAATTGTCGCCTTCTCAAAGCAATGTCAAGGAAACGGCTGAAACGGAAAGTGATCAGAATCAATCTGAATCAGAAGATCAGAATAAGAAAGACGAGTTTCTAGGTTATTCAGATGAGATGGTTTCGAATCTGAATAAGCTAGCCAAAGGATTGATAGAAGGCGGTCATGAAACCGAGTGTAAGGAATTGTATTTTTTCGTCAGAAGGAATGCAATGGAACAGAATTTAAAGCTTTTGCAGTTTGAGAAATTTTCAATTGATGAGATGCAGAAAATGCATTGGGAGCCGATTGAGAAAGAGGTGTCGGCTTGGATGAAGATGTTCAAACAGTTTTGTACATCGTTATTGCCTAGTGAGCGAAAACTGGCGGATTCTGTTTTTACTGGTTACACCGCAATCTCGAATAGATTGTTTAGCCGCCTCGCGCAAATCGTTTTGTTTTATTTTTTAAGTTTCGCAGAGGCGGTGATGATGACAAAACGTTCTGCTGAGAAATTGTTTAAGTTTTTAGATATTTACGAGACGTTGAGAGATAGTATCTCGGAGGCTGAGAAAATATTGCTTGCTGATGAATATATGCATCAACTGAAATCCGCAACGGGGTTGATTAATACTGTTCTCGGTGAGGCTATTTATAACATCTTTATAGATCTTGAAAACTCAATAAAAGCAGATGTATCTAAGACCGCGGTTCCTGGTGGGGCGGTACATCCTTTAACTCGCTACACGATGAATTATTTGAAATACGCGTGCGAGTATAGTGTCACGTTGGAGCAGATATTTAAAGAGCATAAAAGGTCAGATCGGGCCCAATCAGGAGCAGGTGATGAAGATGCTAGCTCTCAAGAACAAGGACAGAACCAGCAGGGGAATCAAACAGAACCTGAATCGCCGTTCCAGTCGCAGTTAGCTAAAATTATGGATTTGTTGGATACGAATCTAGAAGCCAAGTCGAGGTTGTATAAGGATGCGTCGTTGAGCTTGATTTTTATGATGAATAACGGGCGCTATATACTTCAGAAGACAAAGGGGACAGGAGAAATGAGGACATTGATGGGGGATCCGTGGGTGAGGAAACGTTCATCGGATTTAAGGAATTACCACTCGAATTACAAGCGAGAAACATGGACAAAGCTGTTGCAATGTTTGAGTCACGAAGGATTGAGTGTTAATGGGAAGGTGATGAAGCCGGTGCTAAAAGAAAGGTTCAAGAGTTTTAACGCGATGTTTGATGAGATACACAGAACACAAACTACTTGGATAGTGAGCGATGAACAGCTTCAGTCAGAGCTAAGGGTGTCCATATCAGCAATTGTGATCCCGGCTTATAGGTCATTCATGGGGAGGTTCAGTCAAGTGTTTACTCCAGGAAGGCAAACCGAGAAGTATATAAAGTATCAGCCAGAAGATATAGAAACATGTATCGAAGAGCTTTTTGATGGAAGTGCAGCTCAACAAAGCAAGAAGAGATAA | 1968 | 41.21 | MADHDTPPPDTAIITDDHQNSQLNNQHSSIDHLYEKLDQFTSVLLTCTDDQPPEIVDSVHHFADLFDVKVVEYESGSKKWIEDECNSSFIESVDQTGKLLKSFSRFHAHENYANVVNRISGIQQRALSIMEVEFKTILDDYQTSYERDQQRNNDDDREAEKTKQKQLSPSQSNVKETAETESDQNQSESEDQNKKDEFLGYSDEMVSNLNKLAKGLIEGGHETECKELYFFVRRNAMEQNLKLLQFEKFSIDEMQKMHWEPIEKEVSAWMKMFKQFCTSLLPSERKLADSVFTGYTAISNRLFSRLAQIVLFYFLSFAEAVMMTKRSAEKLFKFLDIYETLRDSISEAEKILLADEYMHQLKSATGLINTVLGEAIYNIFIDLENSIKADVSKTAVPGGAVHPLTRYTMNYLKYACEYSVTLEQIFKEHKRSDRAQSGAGDEDASSQEQGQNQQGNQTEPESPFQSQLAKIMDLLDTNLEAKSRLYKDASLSLIFMMNNGRYILQKTKGTGEMRTLMGDPWVRKRSSDLRNYHSNYKRETWTKLLQCLSHEGLSVNGKVMKPVLKERFKSFNAMFDEIHRTQTTWIVSDEQLQSELRVSISAIVIPAYRSFMGRFSQVFTPGRQTEKYIKYQPEDIETCIEELFDGSAAQQSKKR | 655 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 431 | 463 | - | - | |
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 145 | 195 | - | - | |
| Ecan8g02687 | 655 | SUPERFAMILY | Cullin repeat-like | 73 | 645 | IPR016159 | - | |
| Ecan8g02687 | 655 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 83 | 647 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 145 | 164 | - | - | |
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 439 | 463 | - | - | |
| Ecan8g02687 | 655 | Gene3D | Exocyst complex component Exo70 | 66 | 654 | - | - | |
| Ecan8g02687 | 655 | Pfam | Exo70 exocyst complex subunit C-terminal | 268 | 642 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 165 | 180 | - | - | |
| Ecan8g02687 | 655 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan8g02687 | K07195 | exocyst complex component 7 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 85304 | Ecan4g00033 | Ecan8g02687 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr1:43023250 | Ecan8g02687 | Ecan-Chr8:37803915 | dispersed | |
| Ecan | Ecan-Chr8:34113042 | Ecan8g02687 | Ecan-Chr8:37803915 | dispersed | |
| Ecan | Ecan-Chr8:37803915 | Ecan9g00528 | Ecan-Chr9:4435879 | dispersed | |
| Ecan | Ecan-Chr8:37803915 | Ecan4g00033 | Ecan-Chr4:422776 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ecan8g00162 | ACH | 5 | 658 | EXO70 exocyst subunit family | AT3G29400 | 49.028 | 0.0 | 583.0 | |
| Ecan1g04353 | . | 7 | 631 | EXO70 exocyst subunit family | AT5G52340 | 71.04 | 0.0 | 950.0 | |
| Ecan8g02247 | ACH | 24 | 683 | EXO70 exocyst subunit family | AT5G50380 | 54.728 | 0.0 | 709.0 | |
| Ecan8g02687 | ACH | 76 | 687 | EXO70 exocyst subunit family | AT5G13990 | 47.167 | 0.0 | 540.0 | |
| Ecan9g00367 | . | 13 | 611 | EXO70 exocyst subunit family | AT2G39380 | 48.68 | 0.0 | 560.0 | |
| Ecan9g00528 | ACH | 1 | 619 | EXO70 exocyst subunit family | AT5G58430 | 54.14 | 0.0 | 652.0 | |
| Ecan2g02185 | . | 18 | 633 | EXO70 exocyst subunit family | AT5G03540 | 60.227 | 0.0 | 728.0 | |
| Ecan2g03982 | . | 12 | 685 | EXO70 exocyst subunit family | AT4G31540 | 44.428 | 0.0 | 551.0 | |
| Ecan2g02265 | ACH | 4 | 658 | EXO70 exocyst subunit family | AT3G29400 | 48.426 | 0.0 | 573.0 | |
| Ecan2g03941 | ACH | 24 | 633 | EXO70 exocyst subunit family | AT1G72470 | 60.285 | 0.0 | 716.0 | |
| Ecan2g02186 | ACH | 8 | 632 | EXO70 exocyst subunit family | AT5G03540 | 76.592 | 0.0 | 982.0 | |
| Ecan2g03481 | ACH | 24 | 682 | EXO70 exocyst subunit family | AT5G50380 | 54.717 | 0.0 | 712.0 | |
| Ecan1g02867 | ACH | 59 | 644 | EXO70 exocyst subunit family | AT5G13150 | 43.239 | 7.10e-156 | 461.0 | |
| Ecan4g00033 | ACH | 201 | 653 | EXO70 exocyst subunit family | AT5G13150 | 54.447 | 3.99e-174 | 510.0 | |
| Ecan4g03454 | . | 28 | 619 | EXO70 exocyst subunit family | AT1G72470 | 32.945 | 2.71e-86 | 278.0 | |
| Ecan4g03451 | ACH | 25 | 633 | EXO70 exocyst subunit family | AT1G72470 | 63.371 | 0.0 | 768.0 | |
| Ecan5g02349 | . | 11 | 676 | EXO70 exocyst subunit family | AT4G31540 | 69.069 | 0.0 | 947.0 | |
| Ecan5g01356 | . | 85 | 629 | EXO70 exocyst subunit family | AT5G03540 | 54.845 | 0.0 | 566.0 | |
| Ecan5g01355 | . | 85 | 629 | EXO70 exocyst subunit family | AT5G03540 | 54.845 | 0.0 | 565.0 | |
| Ecan6g03099 | . | 30 | 613 | EXO70 exocyst subunit family | AT3G55150 | 37.943 | 2.65e-132 | 399.0 | |
| Ecan6g02692 | . | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 51.375 | 0.0 | 575.0 | |
| Ecan1g01984 | ACH | 7 | 638 | EXO70 exocyst subunit family | AT5G03540 | 80.189 | 0.0 | 1014.0 | |
| Ecan7g02027 | ACH | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 59.409 | 0.0 | 746.0 | |
| Ecan7g00704 | . | 15 | 636 | EXO70 exocyst subunit family | AT4G31540 | 29.135 | 2.13e-76 | 257.0 |