Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ecan8g02693 | ATGTTAGGAAAGCTAGGGCGAAAATTATCGATGCAGAAAAGTGATGTGAAAGATCATCACCAGTATCATCATCAGCCTTCTCCTTATATTGATGAGCTTGCTTTAGCTTCTAAGGATATGCAAGATATGAGAAACTGTTATGATGGGTTATTATCTGCGGCTGCAGCAACGGCAAATAGTATATATGAATTTTCGGAGTCACTAAATGAAATGGGCAACTGCTTGATGGAAAAAAACGTTGCAGATTCTGATCCTGAATGTGGAAAAGTGCTATCAACTTTAGGAAATATGCAATTGGAACTTCAGAAAATTGCTGATAGTTATCGTTCATATGTAATTGTGACGATTACCAATCCATCAGAGTCTCTTCTCAGTGAGCTACGGAAAGTGGAGGAGATGAAACTTCAATGCGATGAAAAAAGAGAGGTGTATGAATACATGATGGCACAACACAGAGAGAAAGGAAAATTGAGAAATGGAAAAGTTGAAAGTTCAATTGCTCAAAAACTACAAGAAGCTCAAGAGGAATATGATGAAGTGACTAGATTATGTGTATTTCGTGTGAAATCGCTTAAGGAGGGACAATGTCGCAGTCTTTTAACACAAGCTGCTCGTCACCACGTTGCTCAGGTGAATTTCTTTCGCAAAGGACTTAAAGCTCTTGAAGCAGTTGAACCTTTCATAAGAAATGTCGCGGAAAAGAATCATATCGATTACCAACTCAGTGAACTACCTGATCGAGAGTCCCGTGGAGATGAACCTATGAGTGGCTATGAAAGTACCGATGATGGAGAATTGAGTTTTGATTACAAACAAAAGAAACAAGGACTCGATGATGATGGGAGCTCACCAAATCCAATGGAGTTGGACCAGGTAGATGTTCTATATCGTCAAGCTTCAAATTTAGAAGATTTGGAGATAAATATGAATAAACCCAAAGGGGAACAGCTTATTGGTAGACAAGCCAGAGTGAGCAGTTATTCTGCCCCACTATTTCCTGAAAAGCTTGGTACATCCGAGAGGCCAAAAGAAACCCAACCCCCACGAAAATTTTACTCCTATGTATTACCTCCCCCCATTGTGGATACCCGAAATCCAGTTTCAAGACCCTCTACATCCATTCCGCATTCCATTTCATCTCAAAATCTACAGCCACCATTGCCACCTGACCATGAGAAGCATTTAAGACGTACCGGTGATGATAACACATCAACATCTGCTTTGAGCTCAAAGGTCCAGTCATCAATAAAAGATGGTAGCGGTATTAATTCGTCCATACAGTTACCTGCTCCCACTGGAAGATTTTCCTTCTCACAGCGGGATAGTTATAGCAGAAATGATAGTAAAGCAGCCAAACGACAATCTTTTTCTGGCCCATTACCACCAAGCAAGCAATTTTCTTTTAAAATGGTATCTAATAATAGCGGGCCCATTACCCCTACTGAACTTCCTCAGCCGCCTTCTCGGGGACCAGTTTCCCAGCCAAATTTGTCAGCGAGTGTGCCCCGCAGTGTTTCTCCACCTCTTATATCTTCACCTAAAATAAGTGAGCTTCACGAGCTTCCTAGGCCCCCTGGTAGTTTACCCTTCTCGAAACCTGTTACTATTTCTAGTGGTTTGATTGGACATTCAGCACCTTTATTATCAAAAAATCAAGAGATCTCTCCACCGAATAAACGTCCTATGTCAACATCAACCTGTCCATCTCCTCTTCCACTTCCACCTTCAGTTGCTACAAAAAGCTTTTCCATACCCTCTGGTAACAATGAGACATGA | 1776 | 41.27 | MLGKLGRKLSMQKSDVKDHHQYHHQPSPYIDELALASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGNCLMEKNVADSDPECGKVLSTLGNMQLELQKIADSYRSYVIVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMAQHREKGKLRNGKVESSIAQKLQEAQEEYDEVTRLCVFRVKSLKEGQCRSLLTQAARHHVAQVNFFRKGLKALEAVEPFIRNVAEKNHIDYQLSELPDRESRGDEPMSGYESTDDGELSFDYKQKKQGLDDDGSSPNPMELDQVDVLYRQASNLEDLEINMNKPKGEQLIGRQARVSSYSAPLFPEKLGTSERPKETQPPRKFYSYVLPPPIVDTRNPVSRPSTSIPHSISSQNLQPPLPPDHEKHLRRTGDDNTSTSALSSKVQSSIKDGSGINSSIQLPAPTGRFSFSQRDSYSRNDSKAAKRQSFSGPLPPSKQFSFKMVSNNSGPITPTELPQPPSRGPVSQPNLSASVPRSVSPPLISSPKISELHELPRPPGSLPFSKPVTISSGLIGHSAPLLSKNQEISPPNKRPMSTSTCPSPLPLPPSVATKSFSIPSGNNET | 591 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ecan8g02693 | 591 | Pfam | BAR domain of APPL family | 32 | 234 | IPR004148 | GO:0005515(InterPro)|GO:0005737(InterPro) | |
| Ecan8g02693 | 591 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 17 | 249 | IPR027267 | - | |
| Ecan8g02693 | 591 | Coils | Coil | 163 | 183 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 401 | 479 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 365 | 386 | - | - | |
| Ecan8g02693 | 591 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 2 | 589 | IPR037488 | - | |
| Ecan8g02693 | 591 | CDD | BAR | 39 | 226 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
| Ecan8g02693 | 591 | SUPERFAMILY | BAR-IMD domain-like | 32 | 229 | IPR027267 | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 492 | 511 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 240 | 265 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 332 | 591 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 531 | 566 | - | - | |
| Ecan8g02693 | 591 | MobiDBLite | consensus disorder prediction | 240 | 257 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ecan8g02693 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 83788 | Ecan2g00725 | Ecan8g02693 | |
| 86029 | Ecan6g02421 | Ecan8g02693 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ecan | Ecan-Chr2:8439278 | Ecan8g02693 | Ecan-Chr8:37841378 | wgd | |
| Ecan | Ecan-Chr6:34555449 | Ecan8g02693 | Ecan-Chr8:37841378 | wgd | |
| Ecan | Ecan-Chr8:37841378 | Ecan8g03487 | Ecan-Chr8:43763882 | wgd |