AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02697 ATGATGAATCCTCTAATCTCGTTACTAGCAGCAGTCGTGTTGTTGTTGGCAGCTTCGTCGGTAAATGCTATCGGATCGGACGCACCGTTCATCGTGGCTCACAAGAAAGCTACACTCGACAGACTCAAATCCGGCTCCGAAAAAGTCTCTGTTTCCATTGACATATACAACCATGGATCTGCGACGGCATATGATGTTAGCCTCACCGATGATGGCTGGTCCCCTGAAATATTCAGCATCATATCAGGGAATACTTCAATCTCTTGGGAAAGACTTGATGTTGGTGGTCTTTTATCTCATTCCTTTGTGTTGGAGTCAAAAGTGAAAACCGTCTTTTACAGCACACCTGCTGTTATTACATACCGTGTGCCCACAAAGGCTGCATTACAGGAGGCATATACAACTTCACTTCTGCCTTTAGACATCCTATCAGATAAGCCTCAGGAGACAAAACTTGATTTTGTTCAGAAGCTGTTGGGGAAGTATGGCTCCTTAATATCTGTGATCTCCATTGTGGTCCTATTCTTCTACCTGCTGGTAACCCCTCCCCCTAAGTCAGCTGCTTCAAAGGGAAGCAAGAAGAGACGCTAA 591 45.18 MMNPLISLLAAVVLLLAASSVNAIGSDAPFIVAHKKATLDRLKSGSEKVSVSIDIYNHGSATAYDVSLTDDGWSPEIFSIISGNTSISWERLDVGGLLSHSFVLESKVKTVFYSTPAVITYRVPTKAALQEAYTTSLLPLDILSDKPQETKLDFVQKLLGKYGSLISVISIVVLFFYLLVTPPPKSAASKGSKKRR 196
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02697 196 Pfam Translocon-associated protein beta (TRAPB) 22 183 - -
Ecan8g02697 196 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 6 195 - GO:0005783(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02697 K13250 translocon-associated protein subunit beta
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr8:37867884 Ecan8g02697 Ecan-Chr8:37871188 tandem