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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02699 ATGAACTCAGAAGAGGCTCCTTCTTCTCCTGTTCGTTCTCCTTTGTCTTCTTCGCCTTCTAATTCACCTCCTCACAACAATTCATCTTCTTCTGATATTAATCCTCCATCTGCTGATCTGGAATATAAGTATTGGGGGACAAATGTAATGGGTGTCCCTGTACCCCCTTCTGCTTGTGCCACCTATGATTCCATTAAAGATGTTGCTGCTAAGATTCCATTACCTCCTGTGACCAGCACCCTCGGAACTGTGTATAACAAACTTAATAACTTAGGCATCAAGGACACTGTCACCGGCGTCTGGGGCAATCTGAAAGTGGGGGAATCTATGAGGGAATCGGCAAAGGGGAAAGTGAAGGTGAAGGCAAGATCGATAACCGAAGGTGGGAAAGAAACCTTTTACAAGCATAACTTCACGACTTTCACCGACGAAAAACTCTTCAAGACTTTCGCTTGTTACCTGGAGACAAAATCTTCAGGCCGAGTTGCGGGAACCTTATATCTTTCTGACATTCATGTGTCTTTCTGTAGCGATCAGCCCTTACAGCTAGTCCAACCAAATACCGGCGTTGAGTCTTGGTTATATTACAAGGTTCAAATCGCATTGAATAAGTTAGTAGCCGTGAAACCAATTGAGGTGACAAAAAATAAGCAGCCAGAGAAGTCCATCACACTCTCCACAATAGATGGTCAAGACTTTAAGCTGATGGGTTTTGTCAAATATGAGAAAGCATCAAAACATCTCCTTAATAGTATGCACGAAGCTTCTCTTAAATCCAAACGGCTTACTCAGTGA 795 43.14 MNSEEAPSSPVRSPLSSSPSNSPPHNNSSSSDINPPSADLEYKYWGTNVMGVPVPPSACATYDSIKDVAAKIPLPPVTSTLGTVYNKLNNLGIKDTVTGVWGNLKVGESMRESAKGKVKVKARSITEGGKETFYKHNFTTFTDEKLFKTFACYLETKSSGRVAGTLYLSDIHVSFCSDQPLQLVQPNTGVESWLYYKVQIALNKLVAVKPIEVTKNKQPEKSITLSTIDGQDFKLMGFVKYEKASKHLLNSMHEASLKSKRLTQ 264
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02699 264 PANTHER GEM-LIKE PROTEIN 2 52 254 IPR037848 -
Ecan8g02699 264 Pfam GRAM domain 136 250 IPR004182 -
Ecan8g02699 264 Gene3D - 130 254 IPR011993 -
Ecan8g02699 264 SMART gram2001c 132 212 IPR004182 -
Ecan8g02699 264 MobiDBLite consensus disorder prediction 1 36 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02699 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr8:37887384 Ecan8g03483 Ecan-Chr8:43752564 dispersed
Ecan Ecan-Chr8:37874453 Ecan8g02699 Ecan-Chr8:37887384 tandem