AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ecan8g02703 ATGGGGGCATCTGAGTCTGTAGAAATCACGAAAGAAGACGAACAAGAACGAGAAGAATATGCAAAAGATTTTCACGATCAAGGTAATCACGAGACGATAAAGTTATTGGAAAAAGATGGTTATAATTCGATGACAAATGCTCTTGAACAAGACCCAGAAATGTCACTTTCTATATCGTCCTTATCACCTCAATTATCATCTCTTAATACGCCACGTTTTGATTCATCTATAAAGGATTCAAACCCTCATCTCATATCAAACATAAATCGTACCTTTTCATTGGATATGATTGATGATGATCGAACGTTTGAGATATACGTGATATGTCACGGTGAATGTCACATGAACCTAAAGCCTGATCTGGTTGCTGGTCGGTGTCCTGAAGCCGCATTAACGCCAAATGGGAAAAGACAATCAAGAGCATTAGCAGTATTTTTAAAATCACAAGGAATTCGGTTTAACGCCATTTATACCTCACCTTTAGATCGGGCTCGTGCAACAGCTATTCCTGTTTGTCAGGAGATGAATTTTCCAGAGAACAAGATACAAACCGCGGATGCACTAAACGATATGAGTCAAGGAAGTTGGGAGGGTTGCCGCCACTCGGATGTATATACCCCTTCGATCCTAAGTGTAATGGAGAGATTACAACCTGATTTTTGTGCACCCTGTGGAGAAACACTAAGGCAAGTGGAATTTCGAATGATGGAATTCTTAAATGGAATAGTGTCATGTTTGCCTGAAAAACTAAAATTTGATTATCTGCCTCCTGATGAGTCTCCTCCGCTGCTACCTAAACTAGATATACCCGTGAGGCCTAAAATAGGTCCATCAAAACGAAAGCCAAGCAAGAGCCGTTTACAAATGGTGCACGCAAGTGGAGATCATGAGGCTGATGATGAGATGTCACCTAGAGTGCCTAACAAGCATCGCGAACATAAGGTGTTCCCTGAATTAAGTTTGAAAAATGTCAACAACGACAGCAACTATAACAATGACAATAACAATTGTTGTCTTCCGACTAGTTCATCTTGTTGCTGCATAGGTGTATTTAGTCATTCGGTACCTATCAGATGTCTAGTTACAAGTATCCTTGGTTGTAGTCCAACCATGTCCACCAAAATCTGCATTCAAGATTCGTCAGTAACGGTTTTTCAATATTCACGGAAAATGGGTTGGCAGATTAAAAGAGTGAATGATACTTGTCATCTTAGACTTATGTAG 1224 40.03 MGASESVEITKEDEQEREEYAKDFHDQGNHETIKLLEKDGYNSMTNALEQDPEMSLSISSLSPQLSSLNTPRFDSSIKDSNPHLISNINRTFSLDMIDDDRTFEIYVICHGECHMNLKPDLVAGRCPEAALTPNGKRQSRALAVFLKSQGIRFNAIYTSPLDRARATAIPVCQEMNFPENKIQTADALNDMSQGSWEGCRHSDVYTPSILSVMERLQPDFCAPCGETLRQVEFRMMEFLNGIVSCLPEKLKFDYLPPDESPPLLPKLDIPVRPKIGPSKRKPSKSRLQMVHASGDHEADDEMSPRVPNKHREHKVFPELSLKNVNNDSNYNNDNNNCCLPTSSSCCCIGVFSHSVPIRCLVTSILGCSPTMSTKICIQDSSVTVFQYSRKMGWQIKRVNDTCHLRLM 407
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ecan8g02703 407 CDD HP-PGM-like 104 189 IPR013078 -
Ecan8g02703 407 SMART PGAM-5 104 360 IPR013078 -
Ecan8g02703 407 Pfam Histidine phosphatase superfamily (branch 1) 105 245 IPR013078 -
Ecan8g02703 407 Gene3D - 98 251 IPR029033 -
Ecan8g02703 407 Gene3D - 310 406 IPR029033 -
Ecan8g02703 407 MobiDBLite consensus disorder prediction 290 307 - -
Ecan8g02703 407 PANTHER PUTATIVE-RELATED 1 256 - -
Ecan8g02703 407 MobiDBLite consensus disorder prediction 265 307 - -
Ecan8g02703 407 SUPERFAMILY Phosphoglycerate mutase-like 104 404 IPR029033 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ecan8g02703 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
86030 Ecan6g02429 Ecan8g02703
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ecan Ecan-Chr6:34619240 Ecan8g02703 Ecan-Chr8:37918870 wgd