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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr1g09013 ATGGAGAGAAACGAGGCGTGTGGCTTGTCACCATTTGCCGGTCGGTTTGATTTGGGAATGGGAATGGGAATGGGAATGGGAATGGGTATGGATATGGGTATGAATCTGGATGATGACGAAAGGGATCTGGTTGCGGCTGCTCGGTTCGATTTTCTTAAGAAAAAAAGGATGCCCAGATTCCGACGAGGTGCATCCGCCGCAGCTGTTCGGTCGTTTCCGCATTTAACTTCCTTTGCTACCCCGATTCCGACAAGTATTGTCGATCAGGGAAGGCTCACATTTCTCTTTAGCAAGAAGCTACAAAAAAGTGACGTTGGCGTACTCAAAAGAATTGTGCTGCCAAAGAAACCAGCCGAAACACACCTACCTGCACTGATCGCTAAGGAAGGTATCATTTTGGAGATGGATGACATGGTTGGCATGCATGTGTGGTGTTTCAAGTTTAGGTTTTGGCCAAACAACAACAGCCGCATGTATGTCCTTGAGGGCACTGGGGAATTTGCTGAGGAGCACGAGTTGCAACTGGGTGACTATATAATGTTGTATCGAGATTCGGTCAACCTCAACTATGTAATACATGCCGTAAAAGCTTATGAAGTGGAGGAGTTCACAAAAAAAGAAGTGAAAACTAGTGTCCGTACTCAGGGGAAATCTGGCAAAACACCACCAAATAACTGCGGTTTGATGAATCAGAGTTGGCCCTGGGGTGGCCTTGAAGTTGAGCTACTTAATCCTACTAACTACCCTATGAACGTTTCGCCCGTAGAGGATCAGATGGACATGACCTTTGTTTATGATACCAGCTATTCCAATGACACTATGACTCCACTTGATTTCTTGGATGGATTCATGACAAGCTACCCAACTCCTCAGCCTAATTTTGCCATTGATAATTTGTCTATTGATGATCTCTATAAGATCTAG 924 45.13 MERNEACGLSPFAGRFDLGMGMGMGMGMGMDMGMNLDDDERDLVAAARFDFLKKKRMPRFRRGASAAAVRSFPHLTSFATPIPTSIVDQGRLTFLFSKKLQKSDVGVLKRIVLPKKPAETHLPALIAKEGIILEMDDMVGMHVWCFKFRFWPNNNSRMYVLEGTGEFAEEHELQLGDYIMLYRDSVNLNYVIHAVKAYEVEEFTKKEVKTSVRTQGKSGKTPPNNCGLMNQSWPWGGLEVELLNPTNYPMNVSPVEDQMDMTFVYDTSYSNDTMTPLDFLDGFMTSYPTPQPNFAIDNLSIDDLYKI 307
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr1g09013 307 Pfam B3 DNA binding domain 96 193 IPR003340 GO:0003677(InterPro)
Enbr1g09013 307 SUPERFAMILY DNA-binding pseudobarrel domain 94 193 IPR015300 -
Enbr1g09013 307 CDD B3-DNA 94 193 IPR003340 GO:0003677(InterPro)
Enbr1g09013 307 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 85 194 IPR044800 GO:0003700(InterPro)
Enbr1g09013 307 SMART B3-2 96 198 IPR003340 GO:0003677(InterPro)
Enbr1g09013 307 Gene3D - 92 211 IPR015300 -
Enbr1g09013 307 ProSiteProfiles B3 DNA-binding domain profile. 96 198 IPR003340 GO:0003677(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr1g09013 K09287 RAV-like factor
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Event-related genes

Select Gene_1 Gene_2 Event_name
86719 Enbr1g09013 Enbr3g01788
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:13154969 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr5:62328191 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr7:26222423 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr7:85389772 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr7:97187498 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr7:108917337 Enbr1g09013 Enbr-Chr1:279361931 transposed
Enbr Enbr-Chr1:279361931 Enbr3g01788 Enbr-Chr3:52878066 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Enbr2g03416 . 16 124 B3 DNA Binding Superfamily AT3G18960 30.0 7.54e-11 60.5
Enbr6g02758 . 115 222 B3 DNA Binding Superfamily AT3G19184 48.148 5.04e-35 130.0
Enbr6g02759 . 79 190 B3 DNA Binding Superfamily AT5G42700 41.071 3.55e-26 104.0
Enbr1g04616 . 40 846 B3 DNA Binding Superfamily AT5G62000 61.604 0.0 986.0
Enbr1g09013 ACH 45 313 B3 DNA Binding Superfamily AT3G26790 41.544 1.50e-55 181.0
Enbr3g04006 . 164 289 B3 DNA Binding Superfamily AT1G05930 31.783 3.62e-11 61.2
Enbr3g04632 . 705 772 B3 DNA Binding Superfamily AT5G60450 50.685 2.25e-21 84.3
Enbr5g03284 . 518 553 B3 DNA Binding Superfamily AT4G32010 58.333 9.95e-11 60.8
Enbr1g08697 . 12 666 B3 DNA Binding Superfamily AT4G30080 55.066 0.0 670.0
Enbr4g01129 . 6 380 B3 DNA Binding Superfamily AT4G00260 22.595 6.76e-12 67.0
Enbr1g02950 . 2 693 B3 DNA Binding Superfamily AT2G28350 54.342 0.0 662.0
Enbr3g01788 ACH 77 197 B3 DNA Binding Superfamily AT3G26790 49.587 3.36e-35 125.0
Enbr4g00557 . 171 289 B3 DNA Binding Superfamily AT1G05930 31.2 3.38e-10 59.3
Enbr1g01957 . 41 616 B3 DNA Binding Superfamily AT4G23980 54.351 0.0 564.0
Enbr1g03398 . 1 505 B3 DNA Binding Superfamily AT2G33860 55.945 2.71e-180 522.0
Enbr1g02972 . 62 772 B3 DNA Binding Superfamily AT5G60450 55.798 0.0 726.0
Enbr1g09420 . 1 665 B3 DNA Binding Superfamily AT4G30080 55.556 0.0 671.0
Enbr7g03278 . 42 751 B3 DNA Binding Superfamily AT4G32010 47.39 0.0 619.0
Enbr6g03462 . 112 230 B3 DNA Binding Superfamily AT3G19184 45.082 7.49e-27 108.0
Enbr2g02098 . 9 129 B3 DNA Binding Superfamily AT5G66980 37.398 5.14e-21 88.2
Enbr2g02093 . 136 200 B3 DNA Binding Superfamily AT1G19850 61.538 4.01e-18 77.4
Enbr5g01942 ACH 43 714 B3 DNA Binding Superfamily AT4G32010 39.499 2.35e-166 495.0
Enbr7g03512 . 25 393 B3 DNA Binding Superfamily AT5G62000 41.27 1.96e-91 294.0
Enbr4g03911 . 1 445 B3 DNA Binding Superfamily AT2G33860 53.761 1.79e-151 448.0
Enbr4g01001 ACH 112 219 B3 DNA Binding Superfamily AT3G19184 45.37 1.64e-29 108.0
Enbr4g01002 ACH 16 214 B3 DNA Binding Superfamily AT3G19184 57.711 3.63e-65 200.0
Enbr8g02485 . 280 392 B3 DNA Binding Superfamily AT4G32010 38.596 2.51e-23 92.4
Enbr8g02486 . 318 432 B3 DNA Binding Superfamily AT4G21550 35.043 2.09e-16 75.5
Enbr6g01202 . 240 280 B3 DNA Binding Superfamily AT2G46530 75.61 7.18e-13 65.1
Enbr3g00698 . 1 668 B3 DNA Binding Superfamily AT4G30080 57.416 0.0 710.0
Enbr1g08886 . 44 119 B3 DNA Binding Superfamily AT4G21550 43.421 5.57e-17 78.6
Enbr1g00456 . 203 657 B3 DNA Binding Superfamily AT4G32010 40.254 3.90e-92 299.0
Enbr4g00643 . 15 488 B3 DNA Binding Superfamily AT1G19220 68.081 0.0 640.0
Enbr6g02299 . 4 660 B3 DNA Binding Superfamily AT1G59750 66.568 0.0 885.0
Enbr6g02298 . 21 317 B3 DNA Binding Superfamily AT1G59750 55.556 2.89e-116 348.0
Enbr7g02874 ACH 8 743 B3 DNA Binding Superfamily AT2G30470 46.5 0.0 658.0
Enbr7g02430 . 277 751 B3 DNA Binding Superfamily AT4G32010 51.758 1.21e-170 503.0
Enbr3g04154 . 33 891 B3 DNA Binding Superfamily AT1G19850 61.45 0.0 979.0
Enbr1g02197 . 1 797 B3 DNA Binding Superfamily AT5G37020 55.631 0.0 830.0
Enbr2g02347 . 103 245 B3 DNA Binding Superfamily AT5G62000 46.98 2.04e-34 126.0
Enbr2g01449 . 37 457 B3 DNA Binding Superfamily AT1G19850 75.0 0.0 662.0
Enbr3g04652 . 62 772 B3 DNA Binding Superfamily AT5G60450 55.496 0.0 756.0
Enbr7g01610 . 518 561 B3 DNA Binding Superfamily AT4G32010 56.818 2.80e-11 60.5
Enbr2g03193 . 207 234 B3 DNA Binding Superfamily AT5G60450 78.571 1.90e-10 53.9
Enbr2g02088 . 136 200 B3 DNA Binding Superfamily AT1G19850 61.538 4.01e-18 77.4
Enbr1g00345 . 159 289 B3 DNA Binding Superfamily AT1G05930 33.813 2.25e-13 67.8
Enbr7g00362 . 15 844 B3 DNA Binding Superfamily AT5G62000 60.671 0.0 958.0
Enbr8g03286 . 15 437 B3 DNA Binding Superfamily AT1G19220 76.279 0.0 665.0
Enbr4g01088 . 113 370 B3 DNA Binding Superfamily AT4G00260 23.282 1.09e-10 61.2
Enbr6g01846 ACH 108 230 B3 DNA Binding Superfamily AT3G19184 56.911 7.17e-42 146.0
Enbr6g01847 ACH 104 230 B3 DNA Binding Superfamily AT3G19184 53.543 5.71e-41 145.0
Enbr6g01849 . 71 199 B3 DNA Binding Superfamily AT5G42700 43.411 1.87e-27 107.0
Enbr8g01467 . 15 447 B3 DNA Binding Superfamily AT1G19220 74.658 0.0 652.0
Enbr9g01265 . 2 108 B3 DNA Binding Superfamily AT5G66980 37.037 2.96e-20 82.4
Enbr8g00650 . 7 616 B3 DNA Binding Superfamily AT4G23980 60.187 0.0 705.0
Enbr7g00762 . 431 682 B3 DNA Binding Superfamily AT3G24650 60.156 3.55e-88 291.0
Enbr1g06235 . 196 289 B3 DNA Binding Superfamily AT1G05930 31.0 1.17e-06 45.8
Enbr1g06884 . 24 317 B3 DNA Binding Superfamily AT2G46530 71.812 5.84e-153 444.0
Enbr1g03572 . 6 225 B3 DNA Binding Superfamily AT4G00260 22.768 2.46e-06 47.4
Enbr4g04511 . 151 200 B3 DNA Binding Superfamily AT1G19850 64.0 8.00e-15 65.1
Enbr1g04589 . 40 388 B3 DNA Binding Superfamily AT5G62000 82.857 0.0 624.0
Enbr1g04590 . 116 239 B3 DNA Binding Superfamily AT5G62000 61.644 4.65e-50 174.0
Enbr7g00007 . 149 325 B3 DNA Binding Superfamily AT5G62000 85.311 7.47e-107 325.0
Enbr7g02899 . 4 216 B3 DNA Binding Superfamily AT5G58280 43.162 2.75e-51 171.0
Enbr7g01589 . 159 289 B3 DNA Binding Superfamily AT1G05930 33.813 2.25e-13 67.8
Enbr3g02847 . 24 581 B3 DNA Binding Superfamily AT2G46530 58.421 0.0 645.0
Enbr2g02380 . 710 794 B3 DNA Binding Superfamily AT5G37020 80.0 8.75e-43 150.0
Enbr4g02870 . 31 280 B3 DNA Binding Superfamily AT3G17010 22.433 2.32e-09 57.8
Enbr2g00583 . 1 593 B3 DNA Binding Superfamily AT4G30080 54.351 0.0 576.0
Enbr7g02901 . 4 265 B3 DNA Binding Superfamily AT5G58280 43.729 3.35e-63 201.0
Enbr3g02304 . 149 325 B3 DNA Binding Superfamily AT5G62000 87.006 3.75e-110 333.0
Enbr3g00366 . 1 796 B3 DNA Binding Superfamily AT5G37020 65.827 0.0 1008.0
Enbr9g00108 . 1 803 B3 DNA Binding Superfamily AT5G37020 65.196 0.0 978.0
Enbr1g03999 . 24 383 B3 DNA Binding Superfamily AT2G46530 65.684 8.22e-169 487.0
Enbr6g00771 . 24 329 B3 DNA Binding Superfamily AT2G46530 56.024 1.65e-113 343.0
Enbr4g02867 . 33 299 B3 DNA Binding Superfamily AT5G66980 20.53 4.01e-08 54.3
Enbr6g02284 . 547 660 B3 DNA Binding Superfamily AT1G59750 65.217 6.42e-44 149.0
Enbr6g02285 . 19 348 B3 DNA Binding Superfamily AT1G59750 57.879 2.89e-136 400.0
Enbr6g02287 . 184 334 B3 DNA Binding Superfamily AT1G59750 44.371 8.76e-30 111.0
Enbr5g03503 . 270 375 B3 DNA Binding Superfamily AT2G30470 46.226 2.25e-27 108.0
Enbr4g01740 . 152 289 B3 DNA Binding Superfamily AT1G05930 31.724 1.43e-10 58.9
Enbr8g03261 . 15 481 B3 DNA Binding Superfamily AT1G19220 76.546 0.0 720.0
Enbr7g02749 . 7 233 B3 DNA Binding Superfamily AT3G19184 55.274 2.18e-74 226.0
Enbr8g03289 . 15 437 B3 DNA Binding Superfamily AT1G19220 76.279 0.0 665.0
Enbr4g01742 . 152 289 B3 DNA Binding Superfamily AT1G05930 31.724 1.43e-10 58.9
Enbr4g01738 . 167 289 B3 DNA Binding Superfamily AT1G05930 33.846 1.56e-09 55.8
Enbr4g01737 . 175 289 B3 DNA Binding Superfamily AT1G05930 33.058 4.03e-13 67.8
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Enbr B3 5.4e-12 CL0405 TF B3