AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr1g09163 ATGCCTTCAATACGCGAAGAAGAAAAAGAAGAGCCACTTCTAACACCAAATCCAGACAGATTCTGCATGTTTCCAATCCAATACCCACAAATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTTTGGACAGCAGAAGAAGTCGATTTATCGCAAGACCAACGTCATTATGACTCGTTAACAGACGGCGAACGTCACTTCGTGACTCACGTTCTCGCATTTTTCGCTGCATCAGATGGAATTGTTTTGGAAAATTTGGCTTCAAGGTTTATGAAAGAGATACAGATCGATGAGGCTCGCGCTTTTTACGGGTTTCAGATTGCCATTGAGAATATTCATTCAGAAATGTATAGCTTGCTTTTGGAATCTTATATTAAGGATTCTAATGAAAAGAATATTTCGTGCTACGAAACTATTCCGTGTGTCCAAAAGAAGGCCAATTGGGCGCTTAAGTGGATCGATGGGTTTATGAAAGAGATACAGATCGATGAGGCTCGCGCTTTTTACGGGTTTCAGATTGCCATTGAGAATATTCATTCAGAAATGTATAGCTTGTTTTTGGAATCTTATATCAAAGATTCTAATGAAAAAAACCGGTTATTTCGTGCTATTGAAACGATTCCTTGGATATTTTTTTCAGGAAGCTTTTGCGCGATATTTTGGTTAAAAAAGCGCGGATTGATGCCAGGACTAACATTCTCCAACGAATTAATCTCACGAGACGAAGGACTACATTGCGACTTTGCTTGTTTGTTATACAAACTACTAAACAACAAACTAACCGAAGAACGCGTAAAAGGCATCGTTTCTGATGCAGTTGAGATCGAGAGAGAGTTCGTTTGTGACGCGTTACCTTGCGCGCTTGTTGGAATGAATGGTGGTCTTATGAGTCAATACATTGAGTTTGTGGCGGATAGATTGTTGGGAGAATTAGGATATGGCAAAATGTATGATGCTCAGAATCCGTTTGATTGGATGGAATTGATTTCGTTACGAGGGAAGACTAATTTTTTCGAGAAGAGAGTCGGGGAGTATCAGAAAGCTTCTGTGATGTCGAGTTTGAATGGGTATGGAAGTGATTCGCATGTTTTTAAAATGGATGAGGATTTTTGA 1113 39.53 MPSIREEEKEEPLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDQRHYDSLTDGERHFVTHVLAFFAASDGIVLENLASRFMKEIQIDEARAFYGFQIAIENIHSEMYSLLLESYIKDSNEKNISCYETIPCVQKKANWALKWIDGFMKEIQIDEARAFYGFQIAIENIHSEMYSLFLESYIKDSNEKNRLFRAIETIPWIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKLLNNKLTEERVKGIVSDAVEIEREFVCDALPCALVGMNGGLMSQYIEFVADRLLGELGYGKMYDAQNPFDWMELISLRGKTNFFEKRVGEYQKASVMSSLNGYGSDSHVFKMDEDF 370
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr1g09163 370 Pfam Ribonucleotide reductase, small chain 210 322 IPR000358 GO:0009263(InterPro)
Enbr1g09163 370 Pfam Ribonucleotide reductase, small chain 20 154 IPR000358 GO:0009263(InterPro)
Enbr1g09163 370 SUPERFAMILY Ferritin-like 156 347 IPR009078 -
Enbr1g09163 370 SUPERFAMILY Ferritin-like 3 155 IPR009078 -
Enbr1g09163 370 CDD RNRR2 21 331 IPR033909 GO:0009263(InterPro)
Enbr1g09163 370 Gene3D Ribonucleotide Reductase, subunit A 1 154 IPR012348 GO:0016491(InterPro)
Enbr1g09163 370 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 156 208 IPR000358 GO:0009263(InterPro)
Enbr1g09163 370 Gene3D Ribonucleotide Reductase, subunit A 155 210 IPR012348 GO:0016491(InterPro)
Enbr1g09163 370 Gene3D Ribonucleotide Reductase, subunit A 211 347 IPR012348 GO:0016491(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr1g09163 K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Enbr1g09163 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:226414865 Enbr1g09163 Enbr-Chr1:284799468 dispersed