AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g00602 ATGCTTCATCCGGCTTTGGATAAAATTCGTTTTGAGAGCTTGACTGATAAGAGCAAGCTAGATGCTCAACCTGAGCTCTTTATCCACATCATTCCTGATAAAACAAACAACACGTTGACCATCATCGACAGTGGAATTGGAATGACAAAAGCTGATTTGGTGAATAATTTGGGAACCATTGCTCGATCTGGTACCAAAGAATTCATGGAAGCTCTTGCCGCTGGTGCTGATGTTAGCATGATTGGACAATTTGGTGTTGGGTTCTACTCGGCTTATCTGGTTGCTGAGAAAGTCATTGTCACCACAAAACACAATGATGATGAGCAGTATGTTTGGGAGTCACAAGCTGGTGGCTCATTCACCATCACTCGTGATGAAAGTGAGCCGCTTGGCAGGGGTACAAAAATTACCCTTTACCTCAAGGAGGACCAGCTTGAGTATCTAGAGGAACGTAGACTCAAGGATCTGATCAAGAAGCATTCTGAGTTCATTAGTTACCCAATCTCTCTATGGGTTGAGAAGACAACTGAGAAGGAGATATCTGATGATGAGGACGAGGAAGAGAAGAAAGACGAGGAAGGCAAAGTCGAGGAGGTTGATGAAGAAAAGGAGAAGGACGAAAAGAAAAAGAAGACTATCAAGGAAGTGTCACATGAGTGGGATTTAATGAACAAGCAAAAACCCATCTGGATGAGGAAACCAGAGGAGATCTCCAAGGAAGAATATGCTGCTTTCTACAAGAGCCTCACAAATGATTGGGAGGAGCACTTGAATGTAAAGCACTTCTCAGTTGAAGGGCAGTTGGAGTTCAAGGCTGTTCTTTTTGTTCCCAAAAGAGCCCCTTTTGACCTCTTTGACTCAAAGAAGAAGCCCAACAACATCAAGCTTTATGTTCGCCGTGTCTTCATTATGGACAACTGTGAGGATATTATTCCAGAATATCTTGGATTCGTTAAGGGTATTGTTGATTCTGAAGATCTTCCTCTTAACATTTCAAGAGAAATGTTGCAACAGAACAAGATCCTCAAGGTTATCCGCAAGAATTTGGTGAAGAAGTGCATCGAACTCTTCCAAGAGATTGCAGAAAACAAGGAAGACTATGCAAAGTTCTATGAAGCATTCTCAAAGAATCTTAAGCTTGGTATCAATGAAGATTCTACAAACAGGACTAAACTGGCTGAGTTACTTCGATACCACTCCACCAAGAGTGGTGATGAACAAACCAGCTTGAAAGACTATGTTACAAGAATGAAAGATGGCCAGAACGACATTTACTATATTACTGGTGAGAGCAAGAAGGCCGTAGAGAACTCCCCATTCCTTGAGAAGTTGAAGAAGAAGGGATATGAGGTCTTGTACATGGTTGATGCCATTGATGAGTATGCTGTGGGCCAGCTGAAGGAGTTTGAAGGAAAGAAGCTTGTTTCTGCCACTAAGGAAGGTCTAAAGCTTGAGGAAACCGAAGATGAGAAGAAAAAGCAAGATTCTTTGAAGGAGAAGTTTGAGGGTTTGTGTAAGGTGATTAAGGATGTGTTGGGTGACAAGGTTGAGAAGGTGGTTGTTTCTGACCGTGTGGTTGACTCACCTTGCTGTTTGGTTACTGGGGAGTATGGATGGACCGCCAACATGGAAAGAATCATGAAGGCACAAGCGTTGAGGGATGCCAGCATGGCTGGATACATGTCCAGTAAGAAGACCATGGAGATCAACCCTGAGAACTCTATTATGGAGGAGCTGAGGAAGAGGGCTGACGCAGACAAGAATGACAAGTCTGTCAAGGACTTGGTGCTGTTGCTGTTCGAGACTGCTTTGTTGACTTCTGGATTCAGCCTTGATGAACCAAACACTTTCGGTAACAGGATTCACAGGATGTTGAAACTTGGTCTGAGCATCGATGAAGATGCAGGTGAGGATGCTGACATCCCTGCTCTTGAAGAGGCTGATGTTGATGCTGATGGCAGCAAGATGGAGGAAGTCGACTAA 1983 43.57 MLHPALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTITRDESEPLGRGTKITLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKTTEKEISDDEDEEEKKDEEGKVEEVDEEKEKDEKKKKTIKEVSHEWDLMNKQKPIWMRKPEEISKEEYAAFYKSLTNDWEEHLNVKHFSVEGQLEFKAVLFVPKRAPFDLFDSKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFQEIAENKEDYAKFYEAFSKNLKLGINEDSTNRTKLAELLRYHSTKSGDEQTSLKDYVTRMKDGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLEETEDEKKKQDSLKEKFEGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDASMAGYMSSKKTMEINPENSIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDEDAGEDADIPALEEADVDADGSKMEEVD 660
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g00602 660 FunFam Heat shock protein HSP 90-beta 2 189 - -
Enbr6g00602 660 FunFam Heat shock protein 90 alpha 393 479 - -
Enbr6g00602 660 Gene3D - 4 190 IPR036890 -
Enbr6g00602 660 Pfam Hsp90 protein 146 646 IPR001404 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0016887(InterPro)|GO:0051082(InterPro)|GO:0140662(InterPro)
Enbr6g00602 660 SUPERFAMILY HSP90 C-terminal domain 504 625 IPR037196 -
Enbr6g00602 660 Coils Coil 484 504 - -
Enbr6g00602 660 Gene3D - 480 630 IPR037196 -
Enbr6g00602 660 CDD HATPase-Hsp90-like 5 164 IPR020575 -
Enbr6g00602 660 Gene3D - 393 479 - -
Enbr6g00602 660 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 108 - -
Enbr6g00602 660 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 5 635 IPR001404 GO:0005524(InterPro)|GO:0005829(PANTHER)|GO:0005886(PANTHER)|GO:0006457(PANTHER)|GO:0006457(InterPro)|GO:0016887(InterPro)|GO:0032991(PANTHER)|GO:0034605(PANTHER)|GO:0048471(PANTHER)|GO:0050821(PANTHER)|GO:0051082(PANTHER)|GO:0051082(InterPro)|GO:0140662(InterPro)
Enbr6g00602 660 MobiDBLite consensus disorder prediction 177 210 - -
Enbr6g00602 660 FunFam Heat shock protein 90 alpha 224 392 - -
Enbr6g00602 660 PRINTS 90kDa heat shock protein signature 38 55 IPR020575 -
Enbr6g00602 660 PRINTS 90kDa heat shock protein signature 81 103 IPR020575 -
Enbr6g00602 660 PRINTS 90kDa heat shock protein signature 56 73 IPR020575 -
Enbr6g00602 660 PRINTS 90kDa heat shock protein signature 150 168 IPR020575 -
Enbr6g00602 660 PRINTS 90kDa heat shock protein signature 132 149 IPR020575 -
Enbr6g00602 660 PIRSF HSP90-HTPG 3 660 IPR001404 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0016887(InterPro)|GO:0051082(InterPro)|GO:0140662(InterPro)
Enbr6g00602 660 Gene3D - 224 392 - -
Enbr6g00602 660 Coils Coil 182 216 - -
Enbr6g00602 660 Hamap Chaperone protein HtpG [htpG]. 1 626 IPR001404 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0016887(InterPro)|GO:0051082(InterPro)|GO:0140662(InterPro)
Enbr6g00602 660 MobiDBLite consensus disorder prediction 179 200 - -
Enbr6g00602 660 MobiDBLite consensus disorder prediction 638 660 - -
Enbr6g00602 660 FunFam Heat shock protein 90 alpha 480 630 - -
Enbr6g00602 660 SUPERFAMILY ATPase domain of HSP90 chaperone-DNA topoisomerase II-histidine kinase 5 175 IPR036890 -
Enbr6g00602 660 SUPERFAMILY Ribosomal protein S5 domain 2-like 225 480 IPR020568 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g00602 K04079 molecular chaperone HtpG
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:22115373 Enbr8g02757 Enbr-Chr8:88942182 dispersed
Enbr Enbr-Chr6:22115373 Enbr6g00606 Enbr-Chr6:22168531 proximal
Enbr Enbr-Chr6:22115373 Enbr6g00608 Enbr-Chr6:22211625 proximal