AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g00660 ATGGCAAATTCCATAGCACAGTTTCAACTCGTAAAAGATTCATGCGATCACCTCCTCATTGCCGTTAAAGATGTGAGTGATCTGTGGCCTCTTGTCAAGGAAGGATTTGAGAAACGGCTTCCGTTTAAAAGAGCTACATTAAACAACAAAACCCATGATCCGGTATCCGTGAATAACTTGCCAGCTGAGTTTACATTGACTACAGATTCAAGACTCCGTGGTCAGGACCCGTTGTCATATTGTTTTCAACAACCATATGCAACTGTGGTTCTTGTGACATGCGAGGATTTAGATGAGTTCAAGACGAGCCTAAAACCACGTCTGAAATTGTCTTTGCAAAATGATGATGAGTGGTTCATTGTATTTGTGTCCAAAGCTGCACCAGATGATGACCAAGCCACCAAAATGGCAACAAAAGTTTATGCCAGAGTTGAAGCGGATTTCAACTCTAGAAGAAGGGAAAGATGCATCAAATTTGATCTCCTTGAACCCGATGTAATTGTTTGGGATGAGTTGGAACACAAACTCATGGAATGCGTCAGAAACACTCTTGATAGACGCATCCAGTTCTATGAGGAGGAGCTTCGTAAGCTCGGTGAACAACGTTTAATGCCAGTTTGGAGCTTCTGTAATTTATTCATTCTCAAGGAAAGCCTAGCATTCATGTTTGAGATGGCTCATCTTTATGTGGATGCATTGCGGGAATATGTTGAACTAGAATTCTGTTACTTGGATGCAGTTAAGAATGCAGGTAAACATGGGGACTTTGGAGGAACGGACCATGGAGATGATCAATCTGCTATACTAAACCCTAGTAAAAAACAACTGGCACAGATTGTTCAAAATAGCTCTTTTAGGGAGTTTGAATTTCGCCAATACTTATTTGCATGTCAAGCAAAGCTATTGTTTAATCTAGACCGTCCATTTGAGGTTGCATCAAGGGGGTTCTCATTCATAGTTAGCTTCTCTGAAGCATTGGCCCTGCATGAGAGTATTTTGCCCTTTTGTTTCAGGGAAGTTTGGGTCCTAACATCGTGTTTGGAGTTGGTCAAATCAACTGCTGTCCATTACAGAGATGGACCAGTGACACCAGAGATACAAAAAGAGTATTATCGTGTACAGGGGGAATTATATTCTCTGTGCAGAGTTAAGTTCATGAGGCTTGCATATTTAATTGGGTATGGATCTGATATAGAAAGAAGTCCGGTCAACAGTGCTTTACTTAGTATGCTACCGTGGCCCAAACCGGCAATTTGGCCTTCAATTCCACCTGATGCTTTATCTGAGGTTCCCGTAAGAGAAAAGACGATTCTTCAAGCTACACCAAGGATCAAGCACTTCGGTATTCGGAGAAAACCGTTGCCTCTTGAACCCTCTTTTCTCCTGCGCGAGACTAATCGGCGAAGACCTTCTCAGTCTGCCGGAAATATGTTTGAAGTGGCAGGTTCAGAAGTTGAGAAATTTTCTTCTCCAGAATCATCTCCTACTTCTATGTCAAGGACCACTTCTATACCGGTGAACTTTGAGAGCTCGGTTGATACCGTGAGACTCGCAGAAGCTTTTGTGGCTGCTGAACATGCTCTCCGTAAAACTATATCTGACCCTGGTTTATGGAAATCATTATCATCTTTAGAGGAGTTTGAGCAAAAATATCTGGAACTATCAAAGGGTGCTGCTGACAATTATCATCTTTCATGGTGGAAAAGGCACGGGGTTGTACTTGATGGTGAAATTGCAGCCACTTTACTTAAGCACGGTAATTACGATCTAGCTGCAAAATTATACGAGAAAGTCTGCGCTCTTTACTCTGGTGAAGGATGGCAAGAGTTATTAGCAGATGTGCTTCCTAGTCTAGCCGAATGCCAAAAGTTACTTGATGATCATCCTGGTTACTTAACATCTTGTGTGAGATTGCTTTCTCTTGATAAAAGCTTGTTTTTGACCAATGAACGCCAAGCTTTTCAGTCAGAACTAGTTCGTCTGGCACACAGTGAAATGGAGGATCCTGTGCCCTTAGATGTCTCGTCTCTAATTACTTTTGCTGGAAATTACGGGCCACCCATGGAACTGTGTGATGGGGATCCGGGCACATTGCCTGTAACTTTATGGAGCGAATTTCCTGATGACATCACTCTAGAATCACTTAGTCTTACCTTGACAGCTACCAATAATGCAGATGCACGTGTAAAGGCAATCAAGAGCTCTGATGCAACGATACTGAACACTGGTAGAAATACAATCACTCTTTCTTTGCCCCCTCAAAAACCTGGTGCATATGTCTTGGGTGTTCTTACAGGGCAGATTGGACATTTACGATTTAGGTCTCATGGTTATTCCAGAGGCGGGCCTGCTGACAGTGATGATCTTATGAGTTTTGATAAGCCAACTAGGCCTATATTGAAGGTGTTAAACCCAAGGCCTCTTGTTGATCTTACTACTGCAGTTTCATCTGCATTGCTGATGAATGAGCCTCAGTGGGTCGGGGTTGTTCTAAATCCAATCAATTATGCCCTCAAGGGTGCAGTTTTGCACATAGAAACTGGACCTGAGTTGAAGATTGAGGAGTCGTGTTCTATAGAAATGGAGAAATATTCAAATGGTGATAGTGATAATTCTTCTGTTGAATCCAAAGAGTTTGCTCAACTTACTCTTAAGAACGGCAGTATAGACTTACCAGACTGGGCAAGCAGTATATTTAGTGTTTTGTGGATTCCCGTACGCGCCATCAAGGATGGGCTATCAAGAGGAACATCTGCAGGGGAACTGTCTTCCCAAAGGTCAGGCATTATTGATGGAATGAGGACCTTAGCTCTAAAACTTGAATTTGGAGTGTGCCACAACCAGATATTAAAAAGGACAATGGCTGTTCATTTCACTGATCCATTCAATGTTATCACACGTGTAGTTAAACAGGGCAGTGACGGTGCTTTGCTTTTGCAGGTGATACTACACTCACAGGTTAAAGCCTCAATAACTATTCACGATGCTTGGTTAGATCTACAAGATGGTTTTTCTCATACTGCACAAGGTGATGGGAGACCAACATCTAACTTATTCCCGCTTGTGGTTCCAGCAACATCTAGAACTGGAATTTTGTTTGATATATCCATGGGAGCTACAACCACTGAAGCTGCATATCAAGAGATAACGGTGCGTCCTGATACAATCTTAAATGTTAAATATGACATTTCTGGGGATAGAAATCTTGGATCTCATAGCCCCGTGTCCCTGGCACCCAAAGGACAGGAGGATAATGTCACAAAGCTGTTGACATTTAGGAGTGTTCTTGTTTTAAAACGGCCTGTGTTGGAACCTTTGTTAGTAGTCGGCTTTGTTCCTCTTCCTTCAAATGGTCTTAGAGTTGGGCAGCTAATTACAATGAAATGGCTAATCGAAAGGGTGCAGTATATTGAGGAGGAAATAATGTATGAAATTAAAGCGAATTCAAAGAATTGGATGATTGCCGGGAGGAAACGAGGCCATGCCACGCTCTCCAGTAAGCAAGGTTCAAAGATTGAGATTTCAATGTTGTGTCTACCACTAGCTGCTGGATATGTTCGTCCTCCACAACTCGACTTGCAAAACATCAACCGGGCTAATATTTGTTGCAATCCTGCTGCTCCTCATTTGGGGAAGCCCCGGAAAGCCGTGGGAAGCCATGAACATTGCCCCGAGGGGCTTCCTTGGAAAAGAAACAGCGCATGGCGTGACAAAATGGACGCCTGA 3726 42.83 MANSIAQFQLVKDSCDHLLIAVKDVSDLWPLVKEGFEKRLPFKRATLNNKTHDPVSVNNLPAEFTLTTDSRLRGQDPLSYCFQQPYATVVLVTCEDLDEFKTSLKPRLKLSLQNDDEWFIVFVSKAAPDDDQATKMATKVYARVEADFNSRRRERCIKFDLLEPDVIVWDELEHKLMECVRNTLDRRIQFYEEELRKLGEQRLMPVWSFCNLFILKESLAFMFEMAHLYVDALREYVELEFCYLDAVKNAGKHGDFGGTDHGDDQSAILNPSKKQLAQIVQNSSFREFEFRQYLFACQAKLLFNLDRPFEVASRGFSFIVSFSEALALHESILPFCFREVWVLTSCLELVKSTAVHYRDGPVTPEIQKEYYRVQGELYSLCRVKFMRLAYLIGYGSDIERSPVNSALLSMLPWPKPAIWPSIPPDALSEVPVREKTILQATPRIKHFGIRRKPLPLEPSFLLRETNRRRPSQSAGNMFEVAGSEVEKFSSPESSPTSMSRTTSIPVNFESSVDTVRLAEAFVAAEHALRKTISDPGLWKSLSSLEEFEQKYLELSKGAADNYHLSWWKRHGVVLDGEIAATLLKHGNYDLAAKLYEKVCALYSGEGWQELLADVLPSLAECQKLLDDHPGYLTSCVRLLSLDKSLFLTNERQAFQSELVRLAHSEMEDPVPLDVSSLITFAGNYGPPMELCDGDPGTLPVTLWSEFPDDITLESLSLTLTATNNADARVKAIKSSDATILNTGRNTITLSLPPQKPGAYVLGVLTGQIGHLRFRSHGYSRGGPADSDDLMSFDKPTRPILKVLNPRPLVDLTTAVSSALLMNEPQWVGVVLNPINYALKGAVLHIETGPELKIEESCSIEMEKYSNGDSDNSSVESKEFAQLTLKNGSIDLPDWASSIFSVLWIPVRAIKDGLSRGTSAGELSSQRSGIIDGMRTLALKLEFGVCHNQILKRTMAVHFTDPFNVITRVVKQGSDGALLLQVILHSQVKASITIHDAWLDLQDGFSHTAQGDGRPTSNLFPLVVPATSRTGILFDISMGATTTEAAYQEITVRPDTILNVKYDISGDRNLGSHSPVSLAPKGQEDNVTKLLTFRSVLVLKRPVLEPLLVVGFVPLPSNGLRVGQLITMKWLIERVQYIEEEIMYEIKANSKNWMIAGRKRGHATLSSKQGSKIEISMLCLPLAAGYVRPPQLDLQNINRANICCNPAAPHLGKPRKAVGSHEHCPEGLPWKRNSAWRDKMDA 1241
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g00660 1241 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 11 1209 IPR045126 GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(PANTHER)|GO:1990071(InterPro)
Enbr6g00660 1241 Pfam Foie gras liver health family 1 568 640 IPR021773 -
Enbr6g00660 1241 Coils Coil 181 201 - -
Enbr6g00660 1241 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1129 1197 IPR022233 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g00660 K20307 trafficking protein particle complex subunit 10
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:23875510 Enbr8g02489 Enbr-Chr8:82664020 dispersed