AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01274 ATGGGGTCTGCTTGTTGTGTTGCCGCTAGAGATAGAACTATAACAGATCGATCTGGTAGTGATGTTATGACAAGGAATGATCGGTATTCGCCATCATGGAGCTTTCGTTGGGATAATCGAGGGCGTGTAGCAGGGGAAGAGTCATCCGTGAATTGCTTGTCTGATGGCGGTGGTACCAACGATAGGCTGGACAATAAATCTCATACAACTGTAGAAACCACTTATGCAACAGAAGGCAGTCCGTTGGACAGTTCACGAAGCCTCACCTGGCATAAGCCGTCACTTTCTGAAGAAATCGGGGTTCCTCGGTCAGATCTATCAAATTCTAAGAATCTTCATGAGGGGAAGGATTCGAGGGGAGCTTCTGTATCTTTGGAACCGTCTCCAACCAAAATGTCAACACAAACACATTCAATTTCTTCCTTTTCAGCATCCCCTTTGTCTTCTTCTCAAAGTCAACTCATGCCCCTTTCAAGTTTGACCCCATCAAGGTGGCCCCGCCGTTCACCAGGTCATCATCTACTACGTCAAGTGTCCGATAGCCGAATTCGAGGCATGATGTCACCTAACTTTTCAATATCCGAAGAGGGTTCACCTTTTATGCACCCTGGGTGGAGCAATAAATCAAACACGGGGTCTCATGGTGGATCTTCAGATGGTTGGTCAAATAGAGATAGATGGTCTTTTGATAGCGGGTCTCTCAGTTTTAGTCGTGATAGAATTAGCAGATCTAGTGGCAGGGTTTCGTCTTCTCCAACTGTTGAGATACAGACATGCGGTGTCTGCTCCAAACTTTTAACCGAAAGATCCTGTTGGAGTAGTCAAAAAATTGTAGCCACCAATGGGCTTCCGGTTGTTGCAATTCTGCTATGTGGGCATGTTTACCATGCAGAATGTTTAGAAAATATGACTCCCGAGATTAACAAGTATGATCCAGCATGCCCTATTTGTACTTTTGGGGTAAAAAAGGTTCTCAAGTTGTCTGAAAAAGCAATGGGGGAAATGGATTTAAAGGGTAAAATCAGCAAGAAATTAAGAAGTCGGGTGGTGGATAGTGGTGATTCGGCTCTGTTTGATCGCTTTACAAGTGGCAGAGGTCCCCGGATGGGCTCAAGTTCAAGCATGAAGAGCTCTACGAGTACGGGAAAGCCATTTTTAAAGAGACACTTCTCTTTTGGCTACAAACCAAACAAATCTTTGTCAGATAACAGTTCTAAGAAAAAGAGATTTTTCTGGTCAAAATCAAGCAAGGAGTGA 1257 44.31 MGSACCVAARDRTITDRSGSDVMTRNDRYSPSWSFRWDNRGRVAGEESSVNCLSDGGGTNDRLDNKSHTTVETTYATEGSPLDSSRSLTWHKPSLSEEIGVPRSDLSNSKNLHEGKDSRGASVSLEPSPTKMSTQTHSISSFSASPLSSSQSQLMPLSSLTPSRWPRRSPGHHLLRQVSDSRIRGMMSPNFSISEEGSPFMHPGWSNKSNTGSHGGSSDGWSNRDRWSFDSGSLSFSRDRISRSSGRVSSSPTVEIQTCGVCSKLLTERSCWSSQKIVATNGLPVVAILLCGHVYHAECLENMTPEINKYDPACPICTFGVKKVLKLSEKAMGEMDLKGKISKKLRSRVVDSGDSALFDRFTSGRGPRMGSSSSMKSSTSTGKPFLKRHFSFGYKPNKSLSDNSSKKKRFFWSKSSKE 418
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01274 418 MobiDBLite consensus disorder prediction 74 92 - -
Enbr6g01274 418 SMART ring-2 259 317 IPR001841 -
Enbr6g01274 418 SUPERFAMILY RING-U-box 254 323 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 123 165 - -
Enbr6g01274 418 PANTHER EXPRESSED PROTEIN 1 323 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 360 418 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 401 418 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 192 222 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 74 172 - -
Enbr6g01274 418 Gene3D Zinc-RING finger domain, C3HC4 (zinc finger) 240 319 IPR013083 -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 366 385 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 203 222 - -
Enbr6g01274 418 MobiDBLite consensus disorder prediction 48 67 - -
Enbr6g01274 418 ProSiteProfiles Zinc finger RING-type profile. 259 318 IPR001841 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01274 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
87006 Enbr4g02726 Enbr6g01274
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:44984081 Enbr8g01125 Enbr-Chr8:34141770 dispersed
Enbr Enbr-Chr1:120837438 Enbr6g01274 Enbr-Chr6:44984081 transposed
Enbr Enbr-Chr4:94188901 Enbr6g01274 Enbr-Chr6:44984081 wgd