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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01306 ATGACTCAAATTAGTCGAAAAATGTGGGGATTTCAACTCAAGAGAACGATAATTTGGCGTGTAGCTTTTCTTAGGCGATGTGCTAGATCTTTGTGGCACCAAATTCTTGGTTGTTGGATTGGAAAATCTATCCGGTACAGGCAATTGTTACACTCTGGTTCGGGTCATTTGATCCCAACCTCGTCTCATCGTCGTTGTCCTCGAGCTGAGAAGACAACGAGGATGAATGACAAGTTTCCGTCAGGAGAAATGACGGAATCCTCTGGTGAAATAACATATTCTAGTAGCTCTGATCATGATCAAGATGTTTCTGATTTGGTGGCTTTGAAGATTACTTTGTTGGGTGATCACCATATTGGCAAAACAAGCTTCTTGGCAAAGTATGTTGGGAAAGAGAAGAATCAAGAAGAAATACAAGCTAAAGGAATGAATCATATGGATAAAACATTGTGTGTTAGAGGAGCCAGGATTTCCTACAGCTTATGGGAAGTGGGTGGTGATGAATTTTGTCCTGATGGCGATTCAAGTGCTTCGATTCCTACAGCTTGCAAAGACTCTGTAGCTATGTTATTCATGTTTGATCTAACGAGTCGTCGTACACTAAATAATGTAATCAATTGGCATCAACAAGCTAGGATTCATAATCAGACGGCGATTCCTGTCATGGTTGGTAGTAAGTTCGACGAATTTGTCCAACTTCCATTAGACTTACAATGGGAGATCGCAAGTCAGGCAAGGGCCTATGCCAAAGCTATAAACGCGACATTGTTCTTCTCAAGTGCGTCTTACAACATAAACGTAAATAAAATATTTAAGTTTGTAACTGCAAAGCTTTTCGACTTGCCATGGACTCTAGAACGTAATCTGACAGTCGGCGAGCCTATTATTGATTTCTAG 897 40.69 MTQISRKMWGFQLKRTIIWRVAFLRRCARSLWHQILGCWIGKSIRYRQLLHSGSGHLIPTSSHRRCPRAEKTTRMNDKFPSGEMTESSGEITYSSSSDHDQDVSDLVALKITLLGDHHIGKTSFLAKYVGKEKNQEEIQAKGMNHMDKTLCVRGARISYSLWEVGGDEFCPDGDSSASIPTACKDSVAMLFMFDLTSRRTLNNVINWHQQARIHNQTAIPVMVGSKFDEFVQLPLDLQWEIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTVGEPIIDF 298
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01306 298 ProSiteProfiles small GTPase Rab1 family profile. 100 298 - -
Enbr6g01306 298 MobiDBLite consensus disorder prediction 60 99 - -
Enbr6g01306 298 PRINTS Transforming protein P21 ras signature 150 172 - -
Enbr6g01306 298 PRINTS Transforming protein P21 ras signature 109 130 - -
Enbr6g01306 298 PRINTS Transforming protein P21 ras signature 256 278 - -
Enbr6g01306 298 PRINTS Transforming protein P21 ras signature 216 229 - -
Enbr6g01306 298 Gene3D - 98 287 IPR027417 -
Enbr6g01306 298 SMART rab-sub-5 109 281 - -
Enbr6g01306 298 MobiDBLite consensus disorder prediction 63 77 - -
Enbr6g01306 298 Pfam Ras family 110 277 IPR001806 GO:0003924(InterPro)|GO:0005525(InterPro)
Enbr6g01306 298 MobiDBLite consensus disorder prediction 78 99 - -
Enbr6g01306 298 PANTHER - 107 297 - GO:0003924(PANTHER)|GO:0005525(PANTHER)
Enbr6g01306 298 FunFam Septum-promoting GTP-binding protein 1 99 288 - -
Enbr6g01306 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 290 IPR027417 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01306 K07976 Rab family, other
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:66598306 Enbr6g01306 Enbr-Chr6:45588814 dispersed
Enbr Enbr-Chr6:45588814 Enbr9g01607 Enbr-Chr9:68218766 dispersed