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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01310 ATGAAATCCACTACTTCAAGATTACTATTATTGTTGCTGGTTATTAATATCATTAACATTAAGTTTAACATTAGTGCTTATTCAAAAAGACCTGATGCTGTGAATGTTGGAGCAATATTTTCATTTGATTCAGTCATTGGTAAGGCTGCAAAAATTGGTATGGAAAAAGCTGTAAATGATGTTAATAATGATTCAAGTATTCTTAATGGCACACTATTGAATTTGTTCATGGAGGATACTAATTGCAGTGTTTTCCACAGTTCTATTGAAGCGTTTCAGATGTTAGAGAGAAATGTAGTGGCTTTAATTGGGCCACAATCATCGACTGTAGCTCATATGATTTCTCAAATTGCAAATGGTCTACAAGTGCCAATAATTTCATATGCTGCTACGGATCCCACTTTATCGTCCCTCCAATTCCCGTACTTCTTTAGAACTACACAAAGTGACTCATACCAAATGGCAGCCATGGCTAATTTGATAGACTTTTATGGATGGAAAGAAGTGCTTGCAATATATATTGATGATGAATTTGGAAGAAATGGGATATTTTCTTTAGATGATGAAATAGAGAAAAGAAAGTCAAAGATTTCTTATAAGTTTGCCTTGCCCACTAACTATAATCTTAACGATATCACTGATGTGCTTAATAAAACGATCTCACTTGGTCCTCGTGTTTATATTGTCCATATTAATCCTGATCGTGCACTCAGAATCTTTGAAGTAGCCCATAAGCTTAATATGATGACGGGTGATTATGTATGGCTAACAACTGATTGGCTTTGTACCACTTTAGCATCGTTTAGCCCAACGAATCAAGAGTTTCTAAGAATTATCGAGGGTGTCGTTGGTCTTTGTCAGCATACTCCACAAGCATCAAAAGATAAAAAATTTGGGTTGAATGTCTACGGATCATATGCATATGATACTGTGTGGACTGTAGCTCACACAATAGATACATTTCTTAATCAAGAAATGGATATGACATTTTCGTCTGTCAGTTCACAGGTTGGGAAACTCAAGATTTTTAATAACGGGAAACAGTTTGTCAAGATTCTATCTGAATCTAATTTCAGTGGTCTGACTGGTCCAATTCACTTCAACGAAGATAGAAACTTGGTTCCACGTGGATATAAAGTCTTTAATATGGCCAAGTTAGAGATTCAAAATGTAGGTTATTGGTCCAACCATTCAGGTCTCTCTATTGAGCCACCTGAATCTTTAAAAGTGAATAAAAGTAGCTCTTCTGGTTTAAATGATAAACTTGGTGTAGTAACTTGGCCTGGCGGCAAGACAGATCGGCCACGTGGATGGGTCATTGGTGATGTGGAAAGACCTTTGAGAATCGGGATACCAAAACGACATAGCTTTGCTGAATTTGTGACAGAATTAAGCAATCATACAATTGAAGGATACTGTATTGATGTGTTTACAGAAGCACTAAAGTTAGTTCCTTATGAACTCCCCTATAAATTTGTGCCATTCGGAGATGGTCGGTCCAACCCTAGTTATGATCGACTTGTAAAACTCGTTACAGATGATGTGTTTGATGGAGCTGTTGGAGATATTGCTATTGTGACAAACAGAACGAAGATTGTGGATTTCACGCAGCCTTATGCCACGAGTGGTCTTGTGATAGTGATACCTATCAACAATTCAAAAGGCAGTGCTTGGGTATTTCTTAGACCGTTTACTGTGGAAATGTGGTGTGTCACTGCAGCGGCTTTTGTATTGATTGCTTTTGTTATCTGGCTTCTTGAACATCGCGTTAATGACGATTTTAGGGGTCCACTTAAGAGACAGCTTGTCACGATATTCTTGTTCAGCTTTTCGACCCTGTTCAAGAGTAACCAGGAAGATACGGTTAGCCCACTTGGACGGATGGTGATGGTGGTATGGCTTTTCCTATTGATGGTAATCACAGCAAGCTATACTGCAAGCTTAACATCCATTCTTACTGTACAGCAACTTTCGTCACCCATCACAGGGATAGATAGCTTAGTGGCTAGTCATCTACCAATTGGGTATCAACGGGGATCATTTGCCAATACTTATTTGGCTGATAATCTTTACATTCCCGAATCTAGGCTCATTCCTCTAAACACATCAGCTGAATATGCTAAAGCATTGCGGTTAGGACCACATAAGGGAGGGGTGGTAGCAATTGTTGAGGAACTTCCTTACATCGAGTTGTTTCTTTCTGAATATGATGATTTTGGGATCGTTGGTCAACCATTCACTAGAAGCGGATGGGGATTTGCTTTCAAGAGAGACTCTCCTCTTGCCACGACTCTATCCCTATCAATTATGCAACTTTCCGAAAATGGAAAGCTTCAAGAAATCCACGACAAATGGTTCTGCCAAAATGGTTGTCCGAGTGCTTTTGGGCGTGGTGGGGAACCTAACCAGCTTCACATGAGCAGCTTTTGGGGTCTATACATAATTTGTGGCATTTTCTCACTCACTGCACTGGTATTATTTTTACTACAAACTGTTCGCCAATATATCTATTACAAACAAAAGCAAATGTTGGATCCACGGTTCCCCTCATTCCCAGCTCCGGTCTCAGCATCATCACAGAGAGGATGTTATGGGGTTTTGTCCAACTTTTTCGATTTTATTGATGAAAAGGAAGAAGCTATTAAGCATATGTTCAAGAAAGACGATGAACCCTCTCAAAATACTTGA 2688 38.99 MKSTTSRLLLLLLVINIINIKFNISAYSKRPDAVNVGAIFSFDSVIGKAAKIGMEKAVNDVNNDSSILNGTLLNLFMEDTNCSVFHSSIEAFQMLERNVVALIGPQSSTVAHMISQIANGLQVPIISYAATDPTLSSLQFPYFFRTTQSDSYQMAAMANLIDFYGWKEVLAIYIDDEFGRNGIFSLDDEIEKRKSKISYKFALPTNYNLNDITDVLNKTISLGPRVYIVHINPDRALRIFEVAHKLNMMTGDYVWLTTDWLCTTLASFSPTNQEFLRIIEGVVGLCQHTPQASKDKKFGLNVYGSYAYDTVWTVAHTIDTFLNQEMDMTFSSVSSQVGKLKIFNNGKQFVKILSESNFSGLTGPIHFNEDRNLVPRGYKVFNMAKLEIQNVGYWSNHSGLSIEPPESLKVNKSSSSGLNDKLGVVTWPGGKTDRPRGWVIGDVERPLRIGIPKRHSFAEFVTELSNHTIEGYCIDVFTEALKLVPYELPYKFVPFGDGRSNPSYDRLVKLVTDDVFDGAVGDIAIVTNRTKIVDFTQPYATSGLVIVIPINNSKGSAWVFLRPFTVEMWCVTAAAFVLIAFVIWLLEHRVNDDFRGPLKRQLVTIFLFSFSTLFKSNQEDTVSPLGRMVMVVWLFLLMVITASYTASLTSILTVQQLSSPITGIDSLVASHLPIGYQRGSFANTYLADNLYIPESRLIPLNTSAEYAKALRLGPHKGGVVAIVEELPYIELFLSEYDDFGIVGQPFTRSGWGFAFKRDSPLATTLSLSIMQLSENGKLQEIHDKWFCQNGCPSAFGRGGEPNQLHMSSFWGLYIICGIFSLTALVLFLLQTVRQYIYYKQKQMLDPRFPSFPAPVSASSQRGCYGVLSNFFDFIDEKEEAIKHMFKKDDEPSQNT 895
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01310 895 SUPERFAMILY Periplasmic binding protein-like I 30 403 IPR028082 -
Enbr6g01310 895 Pfam Receptor family ligand binding region 53 384 IPR001828 -
Enbr6g01310 895 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 853 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Enbr6g01310 895 SMART GluR-14 448 788 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Enbr6g01310 895 SUPERFAMILY Periplasmic binding protein-like II 425 789 - -
Enbr6g01310 895 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 107 135 - -
Enbr6g01310 895 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 47 63 - -
Enbr6g01310 895 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 238 261 - -
Enbr6g01310 895 FunFam Glutamate receptor 683 790 - -
Enbr6g01310 895 Gene3D - 149 400 - -
Enbr6g01310 895 Pfam Ligand-gated ion channel 787 818 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Enbr6g01310 895 PIRSF IGluLR-plant 2 895 IPR017103 -
Enbr6g01310 895 FunFam Glutamate receptor 557 687 - -
Enbr6g01310 895 Pfam Bacterial extracellular solute-binding proteins, family 3 457 565 IPR001638 -
Enbr6g01310 895 Gene3D - 558 682 - -
Enbr6g01310 895 Gene3D - 443 557 - -
Enbr6g01310 895 FunFam Glutamate receptor 442 557 - -
Enbr6g01310 895 CDD GluR-Plant 445 786 - -
Enbr6g01310 895 CDD PBP1-GABAb-receptor-plant 35 401 IPR044440 -
Enbr6g01310 895 Gene3D - 734 793 - -
Enbr6g01310 895 Gene3D - 54 375 - -
Enbr6g01310 895 FunFam Glutamate receptor 149 317 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01310 K05387 glutamate receptor, ionotropic, plant
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:45722032 Enbr9g00777 Enbr-Chr9:35303671 dispersed
Enbr Enbr-Chr6:45622414 Enbr6g01310 Enbr-Chr6:45722032 tandem
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Enbr3g02959 . 50 637 Ion Channels gene family AT2G28260 55.518 0.0 713.0
Enbr1g06686 . 39 274 Ion Channels gene family AT2G29120 39.831 3.12e-51 179.0
Enbr1g06687 . 16 904 Ion Channels gene family AT2G29120 43.483 0.0 737.0
Enbr1g06723 . 16 890 Ion Channels gene family AT2G29120 45.312 0.0 774.0
Enbr9g00035 . 267 824 Ion Channels gene family AT3G02850 68.929 0.0 833.0
Enbr3g04281 . 1 708 Ion Channels gene family AT5G53130 74.616 0.0 1087.0
Enbr1g09174 ACH 539 702 Ion Channels gene family AT5G37500 29.825 2.55e-07 52.4
Enbr3g04405 . 46 100 Ion Channels gene family AT3G07520 49.091 7.86e-14 63.2
Enbr1g08735 . 25 661 Ion Channels gene family AT4G32650 58.733 0.0 737.0
Enbr6g03095 . 1 791 Ion Channels gene family AT5G26240 80.521 0.0 1230.0
Enbr1g08696 . 50 639 Ion Channels gene family AT2G28260 59.153 0.0 756.0
Enbr3g01723 . 54 726 Ion Channels gene family AT5G15410 57.06 0.0 755.0
Enbr4g03982 . 1 715 Ion Channels gene family AT5G53130 63.411 0.0 928.0
Enbr1g02944 ACH 10 676 Ion Channels gene family AT2G28260 70.935 0.0 999.0
Enbr6g00521 . 39 723 Ion Channels gene family AT5G33280 72.847 0.0 1006.0
Enbr4g03731 . 13 795 Ion Channels gene family AT4G22200 64.933 0.0 1070.0
Enbr4g03730 . 13 795 Ion Channels gene family AT4G22200 64.933 0.0 1070.0
Enbr3g02066 . 3 892 Ion Channels gene family AT3G51480 56.071 0.0 1056.0
Enbr1g03389 . 30 862 Ion Channels gene family AT2G29120 35.656 1.28e-158 489.0
Enbr1g00259 . 499 713 Ion Channels gene family AT5G37500 29.68 3.11e-14 74.3
Enbr8g02721 ACH 52 358 Ion Channels gene family AT5G55630 53.42 1.70e-109 328.0
Enbr8g03336 . 543 672 Ion Channels gene family AT2G26650 33.582 5.82e-11 58.5
Enbr6g01310 . 26 905 Ion Channels gene family AT2G32400 53.326 0.0 979.0
Enbr8g02480 . 79 692 Ion Channels gene family AT5G54250 76.699 0.0 991.0
Enbr8g02478 . 250 692 Ion Channels gene family AT5G54250 71.3 0.0 672.0
Enbr8g00733 . 279 889 Ion Channels gene family AT2G29120 41.494 4.34e-160 481.0
Enbr8g00734 . 38 153 Ion Channels gene family AT2G29100 43.966 5.03e-25 96.7
Enbr9g01502 . 25 852 Ion Channels gene family AT2G29100 28.871 3.41e-100 331.0
Enbr9g01501 . 32 849 Ion Channels gene family AT2G29100 30.342 1.70e-110 359.0
Enbr2g02805 . 1 717 Ion Channels gene family AT5G57940 75.275 0.0 1112.0
Enbr1g01899 . 183 343 Ion Channels gene family AT3G27170 28.221 6.05e-06 47.4
Enbr2g04100 . 120 352 Ion Channels gene family AT5G55630 54.043 6.36e-90 268.0
Enbr8g03234 . 15 726 Ion Channels gene family AT5G15410 70.654 0.0 988.0
Enbr1g06519 . 25 661 Ion Channels gene family AT4G32650 58.75 0.0 739.0
Enbr4g00092 ACH 444 730 Ion Channels gene family AT4G30560 77.888 4.72e-166 478.0
Enbr9g00015 . 83 715 Ion Channels gene family AT5G53130 58.125 0.0 763.0
Enbr8g03164 . 54 932 Ion Channels gene family AT1G05200 54.626 0.0 999.0
Enbr5g01899 . 29 816 Ion Channels gene family AT5G48410 35.162 9.38e-147 469.0
Enbr3g01761 . 1 771 Ion Channels gene family AT5G40890 67.179 0.0 1061.0
Enbr3g01753 ACH 497 721 Ion Channels gene family AT2G25600 25.877 7.74e-09 57.8
Enbr1g09575 . 7 431 Ion Channels gene family AT4G18160 60.321 3.03e-170 482.0
Enbr1g02194 . 1 677 Ion Channels gene family AT5G46240 56.447 0.0 821.0
Enbr8g00578 . 59 176 Ion Channels gene family AT5G55630 52.542 2.78e-37 132.0
Enbr5g03414 . 58 354 Ion Channels gene family AT5G55630 48.485 8.14e-104 305.0
Enbr5g03415 . 120 357 Ion Channels gene family AT5G55630 52.101 7.70e-92 273.0
Enbr8g00352 . 3 903 Ion Channels gene family AT3G51480 57.314 0.0 1102.0
Enbr4g00768 . 34 912 Ion Channels gene family AT2G29120 43.64 0.0 744.0
Enbr6g02633 . 7 857 Ion Channels gene family AT2G26650 66.629 0.0 1199.0
Enbr1g02646 . 562 715 Ion Channels gene family AT2G25600 33.117 4.92e-13 63.5
Enbr1g04337 . 60 580 Ion Channels gene family AT2G26650 59.16 0.0 610.0
Enbr1g04338 . 663 837 Ion Channels gene family AT2G26650 41.53 2.08e-33 122.0
Enbr8g03218 . 381 794 Ion Channels gene family AT5G11210 32.701 2.59e-57 200.0
Enbr1g06726 . 16 914 Ion Channels gene family AT2G29120 44.529 0.0 775.0
Enbr2g01550 . 1 725 Ion Channels gene family AT2G24610 64.993 0.0 955.0
Enbr9g02104 . 59 358 Ion Channels gene family AT5G55630 54.333 1.09e-118 346.0
Enbr2g00999 . 22 699 Ion Channels gene family AT5G14870 67.055 0.0 942.0
Enbr4g00036 . 7 857 Ion Channels gene family AT2G26650 68.088 0.0 1209.0
Enbr6g00561 . 10 612 Ion Channels gene family AT2G29120 33.333 4.50e-102 348.0
Enbr4g04423 . 27 822 Ion Channels gene family AT2G24720 28.183 5.60e-95 320.0
Enbr4g04422 . 77 628 Ion Channels gene family AT2G24720 26.95 3.31e-58 207.0
Enbr3g04431 . 46 815 Ion Channels gene family AT3G07520 34.766 1.41e-145 448.0
Enbr3g04430 . 42 810 Ion Channels gene family AT5G48410 35.768 1.72e-140 452.0
Enbr3g00236 . 188 452 Ion Channels gene family AT5G40890 68.889 1.32e-128 385.0
Enbr7g01142 . 42 586 Ion Channels gene family AT3G48010 64.954 0.0 759.0
Enbr8g01434 . 461 509 Ion Channels gene family AT4G32650 69.388 5.10e-19 77.0
Enbr3g04681 ACH 1 678 Ion Channels gene family AT2G28260 70.17 0.0 1008.0
Enbr9g01544 . 106 861 Ion Channels gene family AT2G29120 41.419 0.0 602.0
Enbr4g03210 . 7 430 Ion Channels gene family AT4G18160 55.275 1.60e-160 457.0
Enbr6g01965 . 1 719 Ion Channels gene family AT4G30360 66.802 0.0 1004.0
Enbr4g01599 . 2 730 Ion Channels gene family AT4G03560 64.666 0.0 1000.0
Enbr5g03670 . 5 900 Ion Channels gene family AT4G35290 60.87 0.0 1137.0
Enbr7g02969 . 41 814 Ion Channels gene family AT5G48410 41.258 0.0 584.0
Enbr7g02968 . 37 819 Ion Channels gene family AT3G07520 38.916 0.0 570.0
Enbr3g04190 . 8 745 Ion Channels gene family AT3G17700 59.115 0.0 838.0
Enbr9g01508 . 66 624 Ion Channels gene family AT3G07520 24.132 1.10e-28 119.0
Enbr8g00551 . 545 723 Ion Channels gene family AT3G02850 33.88 3.07e-13 71.2
Enbr3g00476 . 10 866 Ion Channels gene family AT1G42540 65.698 0.0 1194.0
Enbr3g03810 . 18 826 Ion Channels gene family AT3G02850 65.356 0.0 1131.0
Enbr3g03808 . 22 824 Ion Channels gene family AT3G02850 64.822 0.0 1096.0
Enbr3g03815 . 70 534 Ion Channels gene family AT3G02850 64.946 0.0 655.0
Enbr9g00777 . 25 887 Ion Channels gene family AT3G51480 60.138 0.0 1123.0
Enbr8g03141 . 1 750 Ion Channels gene family AT5G49890 75.826 0.0 1129.0
Enbr2g00409 . 2 778 Ion Channels gene family AT3G27170 75.924 0.0 1207.0
Enbr2g00410 . 186 244 Ion Channels gene family AT3G27170 77.966 6.27e-23 99.0
Enbr2g00830 . 194 405 Ion Channels gene family AT4G01840 62.264 3.78e-86 258.0
Enbr1g06731 . 47 912 Ion Channels gene family AT2G29120 44.16 0.0 753.0
Enbr9g01068 . 241 754 Ion Channels gene family AT2G29100 35.104 1.15e-104 330.0
Enbr3g04096 . 391 612 Ion Channels gene family AT3G17700 49.776 5.12e-52 183.0
Enbr1g00159 . 580 730 Ion Channels gene family AT3G02850 39.744 6.21e-20 86.7
Enbr9g01299 . 13 857 Ion Channels gene family AT2G26650 57.706 0.0 1016.0
Enbr7g01554 . 30 717 Ion Channels gene family AT5G57940 65.395 0.0 953.0
Enbr8g03220 . 441 853 Ion Channels gene family AT2G29110 33.333 1.59e-56 199.0
Enbr1g03608 . 571 755 Ion Channels gene family AT2G25600 27.451 1.15e-07 53.5
Enbr8g03158 . 53 931 Ion Channels gene family AT1G05200 57.853 0.0 1086.0
Enbr8g03159 . 57 931 Ion Channels gene family AT1G05200 58.163 0.0 1087.0
Enbr6g02570 . 56 358 Ion Channels gene family AT5G55630 64.026 3.37e-143 408.0
Enbr8g03212 . 762 833 Ion Channels gene family AT2G29110 36.486 6.95e-08 47.4
Enbr4g01212 . 58 932 Ion Channels gene family AT1G05200 65.646 0.0 1221.0
Enbr2g02367 . 461 728 Ion Channels gene family AT3G27170 67.91 1.54e-109 332.0
Enbr5g01900 . 13 819 Ion Channels gene family AT3G07520 34.129 7.30e-152 464.0
Enbr5g01901 . 15 819 Ion Channels gene family AT3G07520 35.223 2.66e-159 483.0
Enbr9g01158 . 86 271 Ion Channels gene family AT5G40890 29.146 7.67e-06 47.8
Enbr6g01309 . 56 932 Ion Channels gene family AT1G05200 64.593 0.0 1208.0
Enbr9g01540 . 106 861 Ion Channels gene family AT2G29120 41.419 0.0 602.0
Enbr9g01496 . 25 852 Ion Channels gene family AT2G29100 28.056 4.12e-95 317.0
Enbr9g01495 . 32 849 Ion Channels gene family AT2G29100 30.342 8.70e-111 360.0
Enbr9g01507 . 537 724 Ion Channels gene family AT3G51480 34.031 3.92e-30 115.0
Enbr7g02448 . 384 507 Ion Channels gene family AT5G53130 33.846 3.49e-13 63.5
Enbr4g00765 . 448 889 Ion Channels gene family AT2G29110 48.565 1.25e-128 394.0
Enbr1g04434 . 453 636 Ion Channels gene family AT2G17260 53.226 8.53e-53 194.0
Enbr6g00560 . 10 545 Ion Channels gene family AT2G29120 31.927 3.44e-86 295.0
Enbr6g02356 . 499 713 Ion Channels gene family AT5G37500 29.68 3.11e-14 74.3
Enbr8g03163 . 478 931 Ion Channels gene family AT1G05200 58.824 0.0 571.0
Enbr8g03162 . 53 931 Ion Channels gene family AT1G05200 57.853 0.0 1086.0
Enbr4g01209 . 58 264 Ion Channels gene family AT1G05200 70.531 6.22e-100 310.0
Enbr6g00276 . 1 717 Ion Channels gene family AT5G57940 75.412 0.0 1124.0
Enbr2g02368 . 461 728 Ion Channels gene family AT3G27170 67.91 1.54e-109 332.0
Enbr2g00412 . 462 607 Ion Channels gene family AT3G27170 81.507 3.28e-69 222.0
Enbr5g03843 . 58 312 Ion Channels gene family AT5G55630 50.588 1.28e-91 287.0
Enbr5g03842 . 120 357 Ion Channels gene family AT5G55630 52.101 6.61e-92 273.0
Enbr5g03410 . 58 312 Ion Channels gene family AT5G55630 50.588 2.23e-91 288.0
Enbr5g03409 . 120 357 Ion Channels gene family AT5G55630 52.101 7.70e-92 273.0
Enbr1g05215 . 557 689 Ion Channels gene family AT3G02850 35.821 2.62e-15 72.4
Enbr5g03412 . 58 312 Ion Channels gene family AT5G55630 50.588 5.15e-96 287.0
Enbr5g03411 . 120 357 Ion Channels gene family AT5G55630 52.101 6.61e-92 273.0