Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g01319 | ATGGATGATAAACATAAAATCAAAATTGCTGTTACCATATCTTGTTTAGCAGTTGTTTCAATCTTATTTGTCAACAAATTTCTTAAACACAGAAAACGAAAACACAACAACAACATTAATTCATGTTACCTGAAATCTCAAGTTAAACCTCAACACACTTTCAAACGTGTTTTGGCCAACAATTCTTATGCCCCCTTTAAACATCTCAAGCTCCAGGATGGTTCTACGGATTTACATCCGTATGAATCTGAGATCATGGATTTGATGGAGAAACTACTATTGGATTTTAAGTTTTCTAATGGAATTACGGATATGGGTGATAAGTATGTTTGGGTTGACAATGAATCGAAGTTAAAAGAACTCGTGGAGGTATTAAGTAAAGAAAGAGTGTTTGCGGTGGATACCGAGCAACATAGCTTACATTCATTCTTGGGGTTTACCGCTCTTATTCAGATTTCTACGAAGGATGAAGATTATTTGGTGGACACTATTGCTCTTCATGACAGTATGGGAATTCTTGCCCCCTTATTTGCTGATCCTAATATGTGCAAGGTCTTCCATGGTGCTGATAATGACGTTATATGGCTACAAAGAGATTTTCATATTTACGTTGTAAACTTATTTGACACTGCAAAGGCATGCGATTTGCTATCAAAGCCACAAAGATCATTAGCCTACTTACTTGAAACATATTGTGGCGTCACAACTAACAAGCTTTATCAGCGTGAAGATTGGCGACAACGTCCTCTGTCAACTGATATGGTTGAATATGCGCGAATGGATGCACACTATTTGCTGTATATTGCAGATTGCCTCGTTTCTGAGCTCCGACTCCAGAAGAATGAAAATTCAGCCGGTCCCGATGACAAATTAGATCTTGTTTTCGAGGCCATCCGGCGTTCGAATGCCTTGTGTCTGCAACTCTTCTCCAAAGAACTAGAAGCTTCCCCAGGGCAGTCTGCTGCTTCTTCAATTATTTCCCGATACTTGAACGATCTTGGAAGTTCTACAGCCAACATGCAGGATCTTGTTAGACGTCTCTGCTCTTGGAGAGATTTGACGGCCCGTATTCATGATGAGAGCCTTAAATATGTACTATCCGATAGTGCTGTTGTCGCTCTTGCTGAAAAAAGTCCATTAACTACTACAGATATTTGCGCCACAATATCACAGGCTGATATGGACGTTGATGTTCTCAGTTCGAGTTCTGCCCCTCGGTGTCCATCCTCTGTTGTCCTGAGTCATTTAGACGTCTTCCCTCGCCTTCTACAAGACGAGATCAACAATCTTGATGATATATTTCAACTAGTTCTTATGAAGCACCTTGGTCCAAATGGTTCTTGTCCTTTATCTCTTTATAATTATGGCCTGTTGTCTAAAACCAACATCAAAGTATCAGATAGATTATCTTCAAAAGGAAATAGGCATAAGCTTTTTAAACAAGTTGCACGGAAGGCTTCTCGGGAGCTTTTTGTCCAGAAGTTCTCCTGCAAAGCTCCAGTCTATCATAACTGCAGAATATATGCCAATGATGGGCGACTATTATGTTACTGTGATCGAAAGAAGTTAGAATGGTATCTACAACGGGATCTGGCAAAAGTTGTTGATGAAGATCCACCAGCCATTATGCTTCTCTTTGAACCCAAAGGGCGCCCTGAAGATGAAGGAAATGAATTCTATATCCATAGTAAGAAAAATATATGCGTAGGTTGTGGGGAAGGAAACCACTATTTACGATACCGTATCATCCCATCATGTTATCGGATACACTTCCCAGAGCATTTGAAGAGTCACCGCTCTCATGATATTGTTCTAGTTTGTGTCGATTGTCATGAAAAAGCACATTCTTCTGCCGAGAAGTACAAGAAAAAAGTAGCTTCTGAATTTGGGATACCCCTATTTGTGCACAAAGTGGTTGACTCTAATGACGAACATGATTCCGGATCTTCCACTTCTGCATTGAAAGTTGGTGATGGTGGCGTGTCCCCTTTAGAGTTGAGAACTGCAGCAATGGCTCTCATAAGACATGGACCTAGGATGCCCCCTCAGCGTCGTGAAGAATTGAAACAGGTTGTTATGAAGTACTATGGAGGCAGAGATATATCAGAGGAAGACCTAGAAAACGCACTACTAGTTGGAATGAGTCCTCATGAGAGAAGACGACTACGGAAAAAGAGAGGTTTGTCTCTTAATAACTCCTCAGGAAACATTGTGTCAGACAAGGAAGTCGAGAGCAGGAATGGAGGTGTGCAGCTTTCCTCCCCTGATAAGTCATTAAATGTTGATAAGGAAGACAGATCAGATAATATTAGTAACAGCCCTTATATAAATTCAGAATTTAACGAAAATGAAAGTTCTGAGCTTGAAAATGCATCTGTTGTGGATATGGATGTTGCGGATTCATCTGCTAAAGTAAATGGCTCTATTCACCAAAGTGGTGATGGTGTGGGCTTCGCTTCATGTAGTTCAAAGCTGTCTTTATTAGGCCATGGACCTCATGGGAAGCAAGTGGTTGATTTTCTGCTGAAGGAACATGGAGAAGACGGGATTCGTGAGTTTTGTCAAAGATGGAGACAAGTATTTGTTGAAGCCATTCATCCTCGTTTTTTACCTGCTGGTTGGGATGTGACACACAG | 2636 | 40.74 | MDDKHKIKIAVTISCLAVVSILFVNKFLKHRKRKHNNNINSCYLKSQVKPQHTFKRVLANNSYAPFKHLKLQDGSTDLHPYESEIMDLMEKLLLDFKFSNGITDMGDKYVWVDNESKLKELVEVLSKERVFAVDTEQHSLHSFLGFTALIQISTKDEDYLVDTIALHDSMGILAPLFADPNMCKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDLLSKPQRSLAYLLETYCGVTTNKLYQREDWRQRPLSTDMVEYARMDAHYLLYIADCLVSELRLQKNENSAGPDDKLDLVFEAIRRSNALCLQLFSKELEASPGQSAASSIISRYLNDLGSSTANMQDLVRRLCSWRDLTARIHDESLKYVLSDSAVVALAEKSPLTTTDICATISQADMDVDVLSSSSAPRCPSSVVLSHLDVFPRLLQDEINNLDDIFQLVLMKHLGPNGSCPLSLYNYGLLSKTNIKVSDRLSSKGNRHKLFKQVARKASRELFVQKFSCKAPVYHNCRIYANDGRLLCYCDRKKLEWYLQRDLAKVVDEDPPAIMLLFEPKGRPEDEGNEFYIHSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSSAEKYKKKVASEFGIPLFVHKVVDSNDEHDSGSSTSALKVGDGGVSPLELRTAAMALIRHGPRMPPQRREELKQVVMKYYGGRDISEEDLENALLVGMSPHERRRLRKKRGLSLNNSSGNIVSDKEVESRNGGVQLSSPDKSLNVDKEDRSDNISNSPYINSEFNENESSELENASVVDMDVADSSAKVNGSIHQSGDGVGFASCSSKLSLLGHGPHGKQVVDFLLKEHGEDGIREFCQRWRQVFVEAIHPRFLPAGWDVTH | 878 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g01319 | 878 | Pfam | HRDC domain | 341 | 384 | IPR002121 | GO:0003676(InterPro) | |
| Enbr6g01319 | 878 | SUPERFAMILY | HRDC-like | 341 | 391 | IPR010997 | GO:0000166(InterPro)|GO:0044237(InterPro) | |
| Enbr6g01319 | 878 | MobiDBLite | consensus disorder prediction | 728 | 757 | - | - | |
| Enbr6g01319 | 878 | SUPERFAMILY | Ribonuclease H-like | 48 | 279 | IPR012337 | - | |
| Enbr6g01319 | 878 | Pfam | 3'-5' exonuclease | 109 | 276 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Enbr6g01319 | 878 | Gene3D | - | 26 | 315 | IPR036397 | GO:0003676(InterPro) | |
| Enbr6g01319 | 878 | MobiDBLite | consensus disorder prediction | 770 | 784 | - | - | |
| Enbr6g01319 | 878 | ProSiteProfiles | HRDC domain profile. | 337 | 426 | IPR002121 | GO:0003676(InterPro) | |
| Enbr6g01319 | 878 | PANTHER | POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED | 30 | 875 | IPR045092 | GO:0000175(InterPro)|GO:0000175(PANTHER)|GO:0000176(PANTHER)|GO:0000467(PANTHER)|GO:0000467(InterPro)|GO:0003727(PANTHER)|GO:0005730(PANTHER)|GO:0071035(PANTHER)|GO:0071036(PANTHER)|GO:0071037(PANTHER)|GO:0071038(PANTHER)|GO:0071039(PANTHER)|GO:0071040(PANTHER)|GO:0071044(PANTHER)|GO:0071051(PANTHER) | |
| Enbr6g01319 | 878 | MobiDBLite | consensus disorder prediction | 721 | 784 | - | - | |
| Enbr6g01319 | 878 | CDD | Rrp6p-like-exo | 109 | 299 | IPR049559 | - | |
| Enbr6g01319 | 878 | SMART | 35exoneu6 | 109 | 277 | IPR002562 | GO:0003676(InterPro)|GO:0006139(InterPro)|GO:0008408(InterPro) | |
| Enbr6g01319 | 878 | FunFam | Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain | 48 | 315 | - | - | |
| Enbr6g01319 | 878 | Gene3D | HRDC domain | 329 | 434 | IPR044876 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g01319 | K12951 | cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Enbr | Enbr-Chr3:54459208 | Enbr6g01319 | Enbr-Chr6:46071509 | dispersed | |
| Enbr | Enbr-Chr6:46071509 | Enbr1g00595 | Enbr-Chr1:17133951 | transposed |