AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01325 ATGAAGCAATGGAGTATGAAGTTGGCATTTTTGTTGTTAGCAATGATGGAAATGATAAATGGTGAAGACCCATATAAGTTTTTTAACTGGAATGTTACTTATGGTGATATCTATCCTCTTGGAGTTAAACAACAGGGAATATTGATAAATGGCCAGTTTCCGGGGCCACAAATTGATTCGGTCACTAATGATAATGTCATTGTTAGTATTTACAACAACTTAGATGAACCTTTGCTTATTACTTGGAATGGGATACAACAAAGAAGGAATTCATGGCAGGATGGAGTTTATGGCACAAATTGCCCAATCCCACCTGGTCAGAATTTCACATACATTCTTCAAGTAAAAGATCAAATTGGTAGCTTCTTTTACTTTCCATCACTCGCGTTTCACCGTGCTGCTGGAGGTTACGGTGGCATTACGATCTCTAGCCGACCTATGATACCGGTTCCATTCCCACCACCTGCTGGAGATTTCACCATTCTAGCTGGTGATTGGTTCAAGCAAAACCATACAGATTTAAAAGCAATATTAGATGGAGGTCATGATCTTCCATTCCCCGACGGTCTTCTCATCAATGGTCGTGGATCTAACGCATTTACGTTCAACGTTGATCAAGGGAAAACATATAGGTTAAGGATTTCGAATGTGGGGCTTACGACATCGATAAACTTCAGAATCCAGGGCCATAAGATGTTGTTAGTTGAGACTGAAGGGACTCATACTCTTCAGAACACATATTCTTCTCTTGATATACATTTAGGCCAGTCATACTCGGTTTTGATCACTGCTGATCAGCCACCACAAAACTACTACATGGTTGTGTCTACCCGGTTTACCTCTCAAGTCCTCACTGCAACCTCCGTTCTTCGTTATAGCAACTCTCCAGGAACTTTTCCAGCTCCTCCACCTGGTGGCCCGACTATCCAAATCGACTGGTCTCTGAATCAAGCCCGATCTATTAGACAAAACTTGACGGCGAGTGGACCAAGGCCTAACCCACAAGGCTCATACCATTATGGTATGGTTAACTTCACACGAACAATAAGACTTGCAAACTCTGCTCCAGTCATAAATGGCAAGCAGAGGTACGCTGTCAACAGCGTGTCATTTATACCAGCAGACACCCCTTTAAAGATTGCTGATTATTTCAAGATCTCGGGTGTGTTTTCGCTTGGAACCATTTCTGACAGCCCCAATGGTGGTGGTGGGTACCTCCAAACTTCAGTTATGGCTGCTGATTTTAGAGCATTTGCTGAGATTGTGTTTGAGAATTCAGAAGATACTGTCCAGTCATGGCACATTGATGGTCACTTTTTCTTTGTTGTTGGGATGGATGGAGGGCCATGGTCTGCTGCTAGCCGAAATAACTACAATTTAAGGGATGGCATTTCCCGCTCTACAGTTCAGGTATATCCACATTCTTGGACTGCATTGTATGTACCGTTAGACAATGTTGGAATGTGGAACATAAGATCTCAGAACTGGGCTCGGCAATACTTGGGTCAACAATTTTATCTTCGGGTTTATTCACCTGTAAACTCATGGAGAGACGAGTACCCTATCCCGAAGAATGCTATTACTTGTGGCAGAGCAAGTGGTCGCAAGACTCGTCCTTTGTAA 1623 42.88 MKQWSMKLAFLLLAMMEMINGEDPYKFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDSVTNDNVIVSIYNNLDEPLLITWNGIQQRRNSWQDGVYGTNCPIPPGQNFTYILQVKDQIGSFFYFPSLAFHRAAGGYGGITISSRPMIPVPFPPPAGDFTILAGDWFKQNHTDLKAILDGGHDLPFPDGLLINGRGSNAFTFNVDQGKTYRLRISNVGLTTSINFRIQGHKMLLVETEGTHTLQNTYSSLDIHLGQSYSVLITADQPPQNYYMVVSTRFTSQVLTATSVLRYSNSPGTFPAPPPGGPTIQIDWSLNQARSIRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKIADYFKISGVFSLGTISDSPNGGGGYLQTSVMAADFRAFAEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSAASRNNYNLRDGISRSTVQVYPHSWTALYVPLDNVGMWNIRSQNWARQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL 540
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01325 540 Gene3D - 341 537 IPR008972 -
Enbr6g01325 540 Gene3D - 157 331 IPR008972 -
Enbr6g01325 540 CDD CuRO-1-AAO-like-1 26 142 IPR034273 GO:0005507(InterPro)
Enbr6g01325 540 Gene3D - 25 146 IPR008972 -
Enbr6g01325 540 Pfam Multicopper oxidase 31 145 IPR011707 GO:0005507(InterPro)
Enbr6g01325 540 FunFam Monocopper oxidase-like protein 156 330 - -
Enbr6g01325 540 SUPERFAMILY Cupredoxins 342 531 IPR008972 -
Enbr6g01325 540 PANTHER MULTI-COPPER OXIDASE 27 506 IPR045087 GO:0016491(PANTHER)
Enbr6g01325 540 SUPERFAMILY Cupredoxins 152 332 IPR008972 -
Enbr6g01325 540 SUPERFAMILY Cupredoxins 22 172 IPR008972 -
Enbr6g01325 540 Pfam Multicopper oxidase 375 512 IPR011706 GO:0005507(InterPro)|GO:0016491(InterPro)
Enbr6g01325 540 FunFam Monocopper oxidase-like protein 342 539 - -
Enbr6g01325 540 Pfam Multicopper oxidase 158 295 IPR001117 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01325 K19791 iron transport multicopper oxidase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:37808257 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr1:103594877 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr1:131158532 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr1:229340863 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr1:229346537 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr2:47995408 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr5:70361784 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr6:5734502 Enbr6g01325 Enbr-Chr6:46294626 dispersed
Enbr Enbr-Chr6:46294626 Enbr6g03512 Enbr-Chr6:129235643 dispersed
Enbr Enbr-Chr6:46294626 Enbr6g00905 Enbr-Chr6:33518662 transposed