AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01345 ATGGCTGAAATCGTAAGCCCTATCCGTACACCGGACCAGTACAAACAGCGAGCACCTGTCTTATCTCCAGACCGACCATTATTCCTCGGATCCAATGACGACAAGCTGGAGCGTGCTCAAGCACGCGCCGCTCGTGCTGCTGCTATTCGCCGAAAACCGGTCACGCAACCGACTGATGCTTCTCCGACCGATCCGTGTCTAGGTCAAGAACAAATCATGGAGTTGTTTCAAAATTGCATCAAATTAGCAAGTGAAAATAAAATTAATCAGAAGAATACATGGGAGTTGAATTTGATAGATCATCTTTGCGATATTATCAAAGTCGAAGAAGAGAATGACGTCGAGACGAACTTTCAGAAGGCGAGCTGCACTCTTGAAGCTGGAGTTAGAATATATTCAATGAGGGTAGATTCAGTTCATTCTGAGGCTTATAAGGTTCTTGGAGGAATTAGTCGAGTTTCACAGGACACTGAACATGATAGTGTAGAGGAAGGCAACGCCGACAATGCGCAAGTTGAAGGCACTTCCAAGAAAGAGAAGGAACACAAGTTATCTCCTTTAACAACATTGGAATCATCCTTCGATGCTCTTAATGTGAAGAAGTTTGATGTTGCATTTGCTGTGGATCCTCTGTATCATCAGACAACTGCACAGTTTGATGAAGGTGGATCAAAAGGTCTCTTGCTGTATAACCTTGGAGTCTATGGTGGATGCAGAATGGTTTTTGACTCATCAGAAGTACCTGGGAAGTGCATGACATGCTCAAGTGACCGTGATAAAATAGAAACGATTGATATTTCTTATGCAACAGATTGTGTTGAACAAATGGTATCAAACTTTTCAAAGAAACTAGAAATCACACCAACTCTCAATCAAATAGTTGATATGTTTGATGAAGATAATAGAAGACCAACAGATATCTTTTCTTCCCAAAGATCTGTGGAACCAGACCATGAAGCTAATGGTGACGACTACATCGATGATGGGCATGATACCTCAGAAACATGGGATTTTGTGAATGACAATCAGACAAGCTTTAATGATGAGGGCACCTATGACGGAGAAGAGGAACATTTCGTTCCGGTTCATCATGAGGTGCTTGACTATTCTACCTTGAGGTGCCCGGTGGATTGGGAAATAGATGACAAATCTCTGACAGTTGACAGTTTCCTATTTCTAAGTCTTGGTCAAACTGGAAAACAAAATGCATGGGCAGGCCCTGATCACTGGAAGTATAGGAAGACTAAAGGTCCAGAAGACCCAGAGAAGGAAAACGGTTCACCATTAATGCCTAAAAAGCAAAGGAATAAGAAACAGGCTGAACCCGATATAGATTTTGTAAAAGCTTTGGAGTTGGACAGTGATGTGAGTAATATATTTGCTCCTCCTAAAAATCCCAACACGTTATTGTTGCCTGTGAAAAGTAGAGAACTCTGTAACACAACACTTCCCGAAGATTGCCATTATCAACCAGAGGATCTTGTCAAGCTATTTCTTCTTCCAAACATTACGTGTCTTGGGAAAAGAGGAAAGAGGTCTTCCGATGAGCCTGGTCAAGAAGCAGAAAGGAATACCGAAAATTTTGCATCTTGGGATGATGAATGTGGTCAATTTGATGATGGAAATGCTTATAGTGATGTTGAGGACTCTGCCACACTTGTCTCTCAACCCCGTCAGGTGAATAAGATTGAAGTCGAATACGACAAAACATCAAAACAAGTTGACGTTCAAGCGCTCAAAGAAATTCTTTGGTCATCAATGCAAGAAACACAAGAAACAAAGACATTTTCTTTTAAGAACATATTGGCATCTTTTCCTACGGATCAGAAGAAACCAGCTGCTGCATCAATTGACATCATCTCCCCACATTTGTGTTTTATTTGTGTGTTGCATTTGGCTAATGAGCACGGATTGAGCATCCATGGATGTGCCGACTTGGATGACCTCACAATACACCTTCCGTCTGAATAG 1971 41.7 MAEIVSPIRTPDQYKQRAPVLSPDRPLFLGSNDDKLERAQARAARAAAIRRKPVTQPTDASPTDPCLGQEQIMELFQNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDVETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVSQDTEHDSVEEGNADNAQVEGTSKKEKEHKLSPLTTLESSFDALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLYNLGVYGGCRMVFDSSEVPGKCMTCSSDRDKIETIDISYATDCVEQMVSNFSKKLEITPTLNQIVDMFDEDNRRPTDIFSSQRSVEPDHEANGDDYIDDGHDTSETWDFVNDNQTSFNDEGTYDGEEEHFVPVHHEVLDYSTLRCPVDWEIDDKSLTVDSFLFLSLGQTGKQNAWAGPDHWKYRKTKGPEDPEKENGSPLMPKKQRNKKQAEPDIDFVKALELDSDVSNIFAPPKNPNTLLLPVKSRELCNTTLPEDCHYQPEDLVKLFLLPNITCLGKRGKRSSDEPGQEAERNTENFASWDDECGQFDDGNAYSDVEDSATLVSQPRQVNKIEVEYDKTSKQVDVQALKEILWSSMQETQETKTFSFKNILASFPTDQKKPAAASIDIISPHLCFICVLHLANEHGLSIHGCADLDDLTIHLPSE 656
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01345 656 Pfam Condensin complex subunit 2 29 526 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Enbr6g01345 656 Pfam Condensin complex subunit 2 545 651 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Enbr6g01345 656 MobiDBLite consensus disorder prediction 155 182 - -
Enbr6g01345 656 PANTHER CONDENSIN COMPLEX SUBUNIT 2 18 653 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(InterPro)|GO:0007076(PANTHER)
Enbr6g01345 656 MobiDBLite consensus disorder prediction 1 32 - -
Enbr6g01345 656 PIRSF Condensin-H 9 550 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Enbr6g01345 656 PIRSF Condensin-H 529 596 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Enbr6g01345 656 PIRSF Condensin-H 586 655 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Enbr6g01345 656 MobiDBLite consensus disorder prediction 404 440 - -
Enbr6g01345 656 MobiDBLite consensus disorder prediction 407 440 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01345 K06676 condensin complex subunit 2
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Event-related genes

Select Gene_1 Gene_2 Event_name
87114 Enbr6g01345 Enbr8g01688
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:46795522 Enbr7g02488 Enbr-Chr7:86562308 dispersed
Enbr Enbr-Chr2:143823934 Enbr6g01345 Enbr-Chr6:46795522 transposed
Enbr Enbr-Chr8:52758484 Enbr6g01345 Enbr-Chr6:46795522 transposed
Enbr Enbr-Chr6:52554007 Enbr6g01345 Enbr-Chr6:46795522 transposed
Enbr Enbr-Chr6:46795522 Enbr6g02910 Enbr-Chr6:107253357 wgd