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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01349 ATGAAGAAAAAGGATAAAATAGCTTTCCTTTTTCTTGTTAAAGATAATCTTCCACTTGATTTCCTCTGGCACAACTTCTTCAAGAATGCAGATCCTGAGAATTTCACAATATACGTACACTCAAAGCCTGGTTTTGTTTTCAATGAGGCAACTACCAGATCAACCTTCTTCTACAACAGACAGTTGGAACACAGTGTTGAGGTAGGCTGGGGTAAGCCAACTATGATTGAGGCAGAGAAACTTTTGTTCAAGGCAGCCCTTGACGATACTACCAATCAGATATTCGTTCTACTCTCTGACAGCTGTGTCCCACTGTACAACTTCAGTTACATATACACATATCTCATGTCAGCTCCTAGAAGTTTCGTGGACAGCTTTATTGATGCCAATGATACGAATGAGAAACGCTATAATCCAGAGATGTCCCCTGACATACCTGAAGACAAATGGCGGAAAGGATCCCAGTGGATCACATTGGTCAGAAAGCATGCAGAGGAGGTTGCATATGATCATGTAGTTTTCCCGATCTTTAATAAACACTGCAAGAGGCGGCCGCTTCTAGACTTGAGCAGAGGAAATGATTCTCTTAGAGAGCAGCAGCAACACAATTGCATCCCAGATGAACATTATGTGCCAACGTTACTTGCAATGCGGGGCTTTGAAGATGAATTGGAGAGGAGAACATTGACTTATTCTTTATGGAACCAGTCAACTGAAACGATGAATACACAAGCCTGGCACCCCGTGACATTTGTTTTTGCAAGTGCCAGCCAAAGAAGTATCCAAGAGATCAAGGATATTGACCATGTTTATTTCAAGTCTGATAACCGGACGGAATGGTGTGGTACTCATGGTAGTGGTCGTTGTTACTTATTTGCTAGGAAGTTTTCACGTGGTGCAGCTATGCGCCTTTTGACTAATGGGGTTGTTGGTCCATATGATCCCAACACATTGGTCTTAGACCGAACATAG 972 42.49 MKKKDKIAFLFLVKDNLPLDFLWHNFFKNADPENFTIYVHSKPGFVFNEATTRSTFFYNRQLEHSVEVGWGKPTMIEAEKLLFKAALDDTTNQIFVLLSDSCVPLYNFSYIYTYLMSAPRSFVDSFIDANDTNEKRYNPEMSPDIPEDKWRKGSQWITLVRKHAEEVAYDHVVFPIFNKHCKRRPLLDLSRGNDSLREQQQHNCIPDEHYVPTLLAMRGFEDELERRTLTYSLWNQSTETMNTQAWHPVTFVFASASQRSIQEIKDIDHVYFKSDNRTEWCGTHGSGRCYLFARKFSRGAAMRLLTNGVVGPYDPNTLVLDRT 323
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01349 323 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 5 305 IPR044174 GO:0016757(InterPro)
Enbr6g01349 323 Pfam Core-2-I-Branching enzyme 7 264 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01349 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
87115 Enbr6g01349 Enbr8g01657
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr1:229421402 Enbr6g01349 Enbr-Chr6:46914298 dispersed
Enbr Enbr-Chr1:278399555 Enbr6g01349 Enbr-Chr6:46914298 dispersed
Enbr Enbr-Chr6:46914298 Enbr8g01504 Enbr-Chr8:46088767 dispersed
Enbr Enbr-Chr6:46914298 Enbr1g03716 Enbr-Chr1:113549009 transposed