Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g01352 | ATGGATTACGAGTTGAGAAGGGCCCGAGAGAAATTGGAGAAAGAGCAAAAAGATAGGAAAGAACAAGCAAAAAAAAGGATTGAAAAGGAAAAGAAAGCAAAACAAGAAGCTGCGAGTCGACATGAAGCCATTGAAGCTGCTCAACGATCTCGCAGAATCCATGCCATTGAATCCCAGCTTAAGGCAGAGCAGCAGATGGAAGAAGATATATTTGCTGGGAGAGGAATTTCTTTTAACCGTGTGCTAGAAGCTGTACCATTCGAAGGTTCTGGAGATAAGATCAAACTGCCAGCTTCCTGTTTCAATGATTTATCTAGTGAAGGTGCTTTTGAAAAAGGTCCTCTCCATTTTCAGCTGTCGGTAGTTCAACAAAATGAGTCATCACAGTCGCAATCAATACCTGCTGAAAGTATAGACCGAGGGTCAACCCATGCAGGGGTGTTGGAATTCACCGCAGAAGAAGGTTCTGTTGGGATCCCTCCTCATATTTGGAATAACTTGTACTCGAAACAAGACCCGATGACTCCTTTAGTTGAAGTTAAGTATGTGTGGCTAGCGAAAGGAACATATGCAAAGCTGCAATCAGAAGAACTTGGGTTCTCGGATATACCCAACCATAAAGCTGTCCTTGAAACAACTCTTCGCCAGCATGCAACCCTTTCTCAAGACGATGTTTTGACTGTCAAACACGGTGTATTGACTTATCATCTGCGTGTGCTTGAACTAAAACCGTCATCAAGTGTATCTGTCCTTGAAACAGATATTGAAGTTGACATCATGGGTCCTGATTCACTTCCTGAGAAAAGCAGCCAGCATGTTCTGAAGCCACTAACTTTTGGAAAATCTGAATCTGGTGTTATCAATGAAGGAGAATACGCCTACTACAAATTTTCATTAGATAATGACATGTGGAGTATAATTAAATCTGGGGATGCTGAAGTTGAAGTGAAGTTGGATTCAGAGGCAAAAGATGGGGATACCGATCTTTATCTTTCACAACACCCACTTTTATTCCCAAATACGCACCAACATGGTTGGTCTAGCCATGACGTGGGTTCCAAGTGCTTGGTTCTCAGCTCAAAAGACAACAGCTTAGGTGCGGGTACTTATAGTGTTGGTGTGTATGGCTTCAAAGGGACTACAAAATACAATCTTTTGGTAACTGTACAAGATACTTCTAACACAAAGGCCAGCCAACAACCTGCGACGTCTTCTACAAACTTGTCAACAGCAGATACAGTAGAGTGCAGCAATTGCAAACATTATATACCGTTAAGAACAATAGCACTTCATGAGGCCTATTGCAGAAGACATAATGTTATCTGTCAACATGCTGATTGTGGTGTTGTCCTTCGGACTGAAGAGGTCAAGAACCACGTGCATTGTGAGAAATGTGGACTAGCTTTTCATAGTGGAGAGATAGAAAAACATATGAAAGTGTTTCATGAACCGCTACGTTGTGGGTGTGGGGTCATCCTTGAGAAGACAGAAATGGTGCAACACCAGTCCTTAGAGTGTGCCTTACGTCTTGTGACATGTCGATTTTGTGGGGACATGGTCCAAGCTGGTTCTTTAGCCGCGGATACACGAGATCGGTTGAGAGGACTTTCAGAACATGAGAGTATTTGTGGGTCAAGAACTGCCCCATGTGACTCCTGTGGTCGGTCTGTCATGTTGAAAGAAATGGAAATTCATCAGGTAGCTGTTCATCAGAAGAATTGA | 1722 | 42.8 | MDYELRRAREKLEKEQKDRKEQAKKRIEKEKKAKQEAASRHEAIEAAQRSRRIHAIESQLKAEQQMEEDIFAGRGISFNRVLEAVPFEGSGDKIKLPASCFNDLSSEGAFEKGPLHFQLSVVQQNESSQSQSIPAESIDRGSTHAGVLEFTAEEGSVGIPPHIWNNLYSKQDPMTPLVEVKYVWLAKGTYAKLQSEELGFSDIPNHKAVLETTLRQHATLSQDDVLTVKHGVLTYHLRVLELKPSSSVSVLETDIEVDIMGPDSLPEKSSQHVLKPLTFGKSESGVINEGEYAYYKFSLDNDMWSIIKSGDAEVEVKLDSEAKDGDTDLYLSQHPLLFPNTHQHGWSSHDVGSKCLVLSSKDNSLGAGTYSVGVYGFKGTTKYNLLVTVQDTSNTKASQQPATSSTNLSTADTVECSNCKHYIPLRTIALHEAYCRRHNVICQHADCGVVLRTEEVKNHVHCEKCGLAFHSGEIEKHMKVFHEPLRCGCGVILEKTEMVQHQSLECALRLVTCRFCGDMVQAGSLAADTRDRLRGLSEHESICGSRTAPCDSCGRSVMLKEMEIHQVAVHQKN | 573 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g01352 | 573 | PANTHER | UBIQUITIN FUSION DEGRADATON PROTEIN 1 | 1 | 545 | IPR004854 | GO:0006511(InterPro)|GO:0030433(PANTHER)|GO:0031593(PANTHER)|GO:0034098(PANTHER)|GO:0071712(PANTHER) | |
| Enbr6g01352 | 573 | Gene3D | - | 76 | 185 | IPR042299 | - | |
| Enbr6g01352 | 573 | Gene3D | - | 187 | 260 | - | - | |
| Enbr6g01352 | 573 | SUPERFAMILY | TRAF domain-like | 414 | 463 | - | - | |
| Enbr6g01352 | 573 | Coils | Coil | 5 | 47 | - | - | |
| Enbr6g01352 | 573 | Gene3D | - | 281 | 395 | - | - | |
| Enbr6g01352 | 573 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 504 | 571 | IPR013083 | - | |
| Enbr6g01352 | 573 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Enbr6g01352 | 573 | Pfam | Ubiquitin fusion degradation protein UFD1 | 90 | 262 | IPR004854 | GO:0006511(InterPro) | |
| Enbr6g01352 | 573 | Pfam | TRAFD1-XAF1, zinc finger | 536 | 565 | IPR049439 | - | |
| Enbr6g01352 | 573 | SUPERFAMILY | Collagen-binding domain | 300 | 387 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g01352 | K14016 | ubiquitin fusion degradation protein 1 |