Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Enbr6g01353 | ATGACATCATCATCACAAGAGAATAAAGCATTAGCAAGTCTTAAAGAGATGGAGAAGGTTATAGGGTATAAGTTCAAGAAAAAGGATTTGTTGCAACAAGCGTTTACGCATCCAAGTTATCAAGGAGCTGAATCATATGAAAGACTCGAGTATGTTGGTGATTCCATTCTAAATTTTCTAATCAGTAAACAACAGTTCTTTATGTACCCGAATCTCCCACCAGGATCATTGACTGCACTTCGAGCTGCCAACGTTGACACTGAGAAGCTAGCACGTGTAGCAGTTAAATATAACTTTCATAAGTACCTACGCCATGAGAATCCAATGCTTAGCAAGCAGATTCGAGTGTTTACGAGTGCTCTTGAAAAGTATCCCTTACATTCATTTGGGTTAATTGATGCTCCAAAGACTTTAGCCGATATTGTTGAATCCACAATAGGAGCTATCTACGTTGACAGCAATTCTTCAATCGATACCACATGGGAGGTAGCTAAAGTTCTACTCGAGCCCATGATCACTCCTGAAATGCTCCAACACAATCCAGTAAGGAAGCTCAATGAACTCTGTCACAAAAAGAAACTGAAGATACGATTCAGAGACAAATGGTCAAAACAAGGAGTGTACGAAGTTTTTGTTGATAATCAACTTAAAGGAAGAGGTGAATACAAAGCAAAGAAGGAAATTGCGTTGAATAGAGCAGCTGAGGATGCATGTAACAACATTTTGAACAGCATTTATAAAAAACATACGCAAATGTCCGAGTTAGTCACCGAGCCATGCTCACCATTATTTTTGCCAAGCCTTATGGACGTTGAGACGATCATAGGATACAACTTCAAAAACAAAGACTTACTGAAAGAAGCTTTAACACATCATTCATACAAAGACGATATTTGTCAATCTTACGAGCGACTTGAGTACCTTGGAGACTCGGTTTTAAACCTTATGATCACCAAGGAACATTATTTCTTGTACCCGAAAATGAAGTCTGGTGACTTGACTCTATTACGTGCGGCTAATGTTGATACCGAAGCTTTGGCCCGTGTTGCATTTAAACATGGTTTGCATAGATATCGTCGAGTCTATAATTGGTGCAGTTTATGTCGATACCAACTTATCCATGGACGATACATGGGAGTTGGCGAAGAAGTTGTTACAACCTTTGACAACGTCGGAAAACCTCAACTTGAACCCGGTGACAAAGTTGAACCAAACGTGCCAGAAGATGGGAATAAAGCTCGAGTACAAAAATTTGTGGGTCGAGAAAGGGGATATTGA | 1278 | 39.67 | MTSSSQENKALASLKEMEKVIGYKFKKKDLLQQAFTHPSYQGAESYERLEYVGDSILNFLISKQQFFMYPNLPPGSLTALRAANVDTEKLARVAVKYNFHKYLRHENPMLSKQIRVFTSALEKYPLHSFGLIDAPKTLADIVESTIGAIYVDSNSSIDTTWEVAKVLLEPMITPEMLQHNPVRKLNELCHKKKLKIRFRDKWSKQGVYEVFVDNQLKGRGEYKAKKEIALNRAAEDACNNILNSIYKKHTQMSELVTEPCSPLFLPSLMDVETIIGYNFKNKDLLKEALTHHSYKDDICQSYERLEYLGDSVLNLMITKEHYFLYPKMKSGDLTLLRAANVDTEALARVAFKHGLHRYRRVYNWCSLCRYQLIHGRYMGVGEEVVTTFDNVGKPQLEPGDKVEPNVPEDGNKARVQKFVGRERGY | 425 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Enbr6g01353 | 425 | SMART | riboneu5 | 29 | 177 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | SMART | riboneu5 | 283 | 401 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | Gene3D | Ribonuclease III domain | 264 | 415 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | ProSitePatterns | Ribonuclease III family signature. | 303 | 311 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | ProSiteProfiles | Ribonuclease III family domain profile. | 14 | 154 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | PANTHER | DICER-RELATED | 8 | 246 | - | GO:0003723(PANTHER)|GO:0004525(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0030422(PANTHER) | |
| Enbr6g01353 | 425 | Pfam | Double-stranded RNA binding motif | 181 | 240 | IPR014720 | - | |
| Enbr6g01353 | 425 | SUPERFAMILY | RNase III domain-like | 13 | 174 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | Gene3D | - | 177 | 253 | - | - | |
| Enbr6g01353 | 425 | ProSitePatterns | Ribonuclease III family signature. | 47 | 55 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | CDD | RIBOc | 283 | 360 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | Pfam | Ribonuclease-III-like | 281 | 360 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | CDD | RIBOc | 29 | 177 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | SUPERFAMILY | RNase III domain-like | 267 | 361 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | ProSiteProfiles | Ribonuclease III family domain profile. | 268 | 358 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | FunFam | Endoribonuclease dicer-like 1 | 8 | 175 | - | - | |
| Enbr6g01353 | 425 | SUPERFAMILY | dsRNA-binding domain-like | 136 | 241 | - | - | |
| Enbr6g01353 | 425 | Gene3D | Ribonuclease III domain | 2 | 176 | IPR036389 | GO:0004525(InterPro)|GO:0006396(InterPro) | |
| Enbr6g01353 | 425 | Pfam | Ribonuclease III domain | 47 | 153 | IPR000999 | GO:0004525(InterPro)|GO:0006396(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Enbr6g01353 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Enbr | Enbr-Chr5:38375652 | Enbr6g01353 | Enbr-Chr6:46984544 | transposed | |
| Enbr | Enbr-Chr5:94894081 | Enbr6g01353 | Enbr-Chr6:46984544 | transposed | |
| Enbr | Enbr-Chr6:78519035 | Enbr6g01353 | Enbr-Chr6:46984544 | transposed | |
| Enbr | Enbr-Chr4:40827869 | Enbr6g01353 | Enbr-Chr6:46984544 | wgd |