AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01354 ATGATTAAACACATACTAAACAAGCTTCCAAAGAAATCATCTTCTAAATCGTCACATAATGATGAAGATATAGATTTTGGTGCTATAAATTCATCATCTAGTAAAGTTTCAAGTTCGAGTAAATCGAATGATGAAGCGCGTAATTCGAATGTTAAGCCTGGTCAAGGGAAAAAATCAGGCCCTGTTGTGACCCAAGTGGTGGAGGTAGTAAATCATGATTCTTATGAAGCATTGCCTAGTTTTCGGGAAGTATCAAGTTCAGAAAAACAGAATTTGTTTATCAAGAAGTTGAATATGTGTTGTGTAGTGTTTGATTTCAATGACGCTGTTAAGGATTCGAAAAAGAAGGATGTGAAGAAACAGACATTGCTTGAGGTTGTTGATTATGTTTCCTCGGTTAATTCAAAGTTTAATGAAGTTACAATTCAGGAGATCACGAAAATGGTGGCTGCTAATCTGTTTAGGTCTTTGCCTAATTTGAATCACGAAAACAAAGTCTTGGATTTATATGATCAAGAAGATGATGAGTTTTATATGGATCCTTCATGGCCACATCTGCAAGTTGTGTATGAGTTCCTTCTTAGGTTTGTGGCTTCATCAGAGACAGATGCGAAGCTTGCAAAAAGATATCTTGATCATTCATTCGTGTTGAAATTGCTTGATCTTTTTGATTCAGAAGATCAAAGAGAAAGGGAGTATCTGAAGACGATCATGCACCGGATATATGGAAAGTTCATGGTGCATCGCCCGTTTATCAGGAAAGCCATCAACAATATCTTCTATCTTTTCATATTTGAAACAGGTAAGCACAATGGGATAGCTGAATTGCTTGAGCTTTTGGGTAGTATAATTAATGGGTTTGCTTTGCCATTGAAGGAAGAACATAAGCATTTTCTTGCCCATGTTTTGATTCCCCTTCACAAGCCCAGAAGTCTATCGGTTTATCAGCCGCAACTATCATACTGTGTTAGTCAGTTTATTGAAAAAGACTCCAAGTTGGCTGATATGGTGATTCGTGGTTTATTAAAGTATTGGCCTGTAACTAATAGTTCAAAAGAGGTCTTGTATCTTAGTGAATTGGAGGAAATACTTGAAGCTACACAGGCTCCGGAATTTGAGAAGTGTATGGTCCCTTTGTTTCGTCAGATTGGCCATTGCCTAAATAGCTCACATTTTCAGGTTGCAGAACGTGCACTGTTTCTATGGAATAACGAGCATATAAGGAATCTGATAAGTCAAAATCGCAAGGTGATTCTGCCCATTATATTCGCCCCCTTGGAGAAAAATACACAAGGTCATTGGAACCAAGCCGTTCAAAGCCTGACCGTAAATGTCAAAAAACTACTATCAGATTCCGATCAATTATTATTCGCAGATTGCCTGGTCAAGTACCAAGAATATGAAACCAAGGAGAAGGAAAGACTAGCAAAGCGACAGTTAACATGGAGCCGTCTGGATGCCATTGCAGCTTCCAGGAACGAGCCTATGGCCATCTCGAGGTTTGCCTCTTCTGTTACTATCACCACTGTGAATTAA 1536 38.54 MIKHILNKLPKKSSSKSSHNDEDIDFGAINSSSSKVSSSSKSNDEARNSNVKPGQGKKSGPVVTQVVEVVNHDSYEALPSFREVSSSEKQNLFIKKLNMCCVVFDFNDAVKDSKKKDVKKQTLLEVVDYVSSVNSKFNEVTIQEITKMVAANLFRSLPNLNHENKVLDLYDQEDDEFYMDPSWPHLQVVYEFLLRFVASSETDAKLAKRYLDHSFVLKLLDLFDSEDQREREYLKTIMHRIYGKFMVHRPFIRKAINNIFYLFIFETGKHNGIAELLELLGSIINGFALPLKEEHKHFLAHVLIPLHKPRSLSVYQPQLSYCVSQFIEKDSKLADMVIRGLLKYWPVTNSSKEVLYLSELEEILEATQAPEFEKCMVPLFRQIGHCLNSSHFQVAERALFLWNNEHIRNLISQNRKVILPIIFAPLEKNTQGHWNQAVQSLTVNVKKLLSDSDQLLFADCLVKYQEYETKEKERLAKRQLTWSRLDAIAASRNEPMAISRFASSVTITTVN 511
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01354 511 PIRSF PP2A-B56 3 510 IPR002554 GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro)
Enbr6g01354 511 Gene3D - 85 487 IPR011989 -
Enbr6g01354 511 SUPERFAMILY ARM repeat 90 472 IPR016024 -
Enbr6g01354 511 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 78 489 IPR002554 GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro)
Enbr6g01354 511 MobiDBLite consensus disorder prediction 24 55 - -
Enbr6g01354 511 PANTHER SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro)
Enbr6g01354 511 FunFam Serine-threonine protein phosphatase 2A regulatory subunit 85 488 - -
Enbr6g01354 511 MobiDBLite consensus disorder prediction 1 62 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01354 K11584 serine/threonine-protein phosphatase 2A regulatory subunit B'
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr6:47029356 Enbr8g00812 Enbr-Chr8:23739253 dispersed