AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enbr6g01357 ATGAATGCTTACAAGGCTTACAAAGCATGTGTTCCAATAGCATGGAGTCCCAACCTATACATTACCTTAGTCAGGGGAATCCCGGGAACCCGGAAACTTCATAGGCGCACTCTTGAAGCGTTGCGGTTAGGAAAGTGTCATCGAACTGTTATGCGATGGAATACTCCTACCGTTCGAGGAATGCTCCAACAGGTTAAAAGATTGGTTGTTATCGAGACTGAAGAAATGTTCAAGGCACGTAAGGAAAAGGAAGCAAAGCATCGTGCTATCCGTCCACCTTTGGTTGTCGGCCATCATATTCCTACTCCTCCTGCAAAAGATTCGGCTCAACAGGCTGCTTAG 342 46.49 MNAYKAYKACVPIAWSPNLYITLVRGIPGTRKLHRRTLEALRLGKCHRTVMRWNTPTVRGMLQQVKRLVVIETEEMFKARKEKEAKHRAIRPPLVVGHHIPTPPAKDSAQQAA 113
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enbr6g01357 113 Gene3D - 17 78 IPR036919 -
Enbr6g01357 113 NCBIfam 50S ribosomal protein L30 19 72 IPR005996 GO:0003735(InterPro)|GO:0006412(InterPro)|GO:0015934(InterPro)
Enbr6g01357 113 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L30 1 103 IPR005996 GO:0003735(InterPro)|GO:0005739(PANTHER)|GO:0006412(InterPro)|GO:0015934(InterPro)
Enbr6g01357 113 CDD Ribosomal-L30 19 72 IPR005996 GO:0003735(InterPro)|GO:0006412(InterPro)|GO:0015934(InterPro)
Enbr6g01357 113 Hamap Large ribosomal subunit protein uL30 [rpmD]. 16 73 IPR005996 GO:0003735(InterPro)|GO:0006412(InterPro)|GO:0015934(InterPro)
Enbr6g01357 113 MobiDBLite consensus disorder prediction 82 113 - -
Enbr6g01357 113 SUPERFAMILY Ribosomal protein L30p-L7e 18 72 IPR036919 -
Enbr6g01357 113 FunFam 50S ribosomal protein L30 17 98 - -
Enbr6g01357 113 Pfam Ribosomal protein L30p-L7e 20 69 IPR016082 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enbr6g01357 K02907 large subunit ribosomal protein L30
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Enbr Enbr-Chr4:40735605 Enbr6g01357 Enbr-Chr6:47052448 wgd